Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 GXYLT1P4-201ENST00000613576 1192 ntBASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 AC004263.2-201ENST00000617183 678 ntBASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 AC006449.5-201ENST00000610658 2098 ntBASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 LINC02199-201ENST00000506655 2702 ntBASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 AC092171.3-201ENST00000610122 2651 ntBASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 PC-208ENST00000529047 1607 ntTSL 3 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 TSPY7P-201ENST00000431358 1114 ntBASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 TSPY20P-201ENST00000450910 630 ntBASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 AC034232.1-201ENST00000506026 1064 ntBASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00242Q5T6M2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC11.9□□□□□ -0.51
LINC00242Q5T6M2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
LINC00242Q5T6M2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC11.9□□□□□ -0.51
LINC00242Q5T6M2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
LINC00242Q5T6M2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC11.89□□□□□ -0.51
LINC00242Q5T6M2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00242Q5T6M2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC00242Q5T6M2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00242Q5T6M2 AC026691.1-201ENST00000602502 2017 ntBASIC11.89□□□□□ -0.51
LINC00242Q5T6M2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00242Q5T6M2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00242Q5T6M2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC00242Q5T6M2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC00242Q5T6M2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC00242Q5T6M2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms