Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DEFA3P59666 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DEFA3P59666 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.27■□□□□ 0.04
DEFA3P59666 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DEFA3P59666 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DEFA3P59666 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DEFA3P59666 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.27■□□□□ 0.04
DEFA3P59666 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.27■□□□□ 0.04
DEFA3P59666 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.27■□□□□ 0.04
DEFA3P59666 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
DEFA3P59666 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
DEFA3P59666 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DEFA3P59666 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DEFA3P59666 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.27■□□□□ 0.03
DEFA3P59666 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
DEFA3P59666 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.27■□□□□ 0.03
DEFA3P59666 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.27■□□□□ 0.03
DEFA3P59666 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
DEFA3P59666 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DEFA3P59666 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.27■□□□□ 0.03
DEFA3P59666 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.27■□□□□ 0.03
DEFA3P59666 AC092364.2-201ENST00000596710 2692 ntBASIC15.27■□□□□ 0.03
DEFA3P59666 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DEFA3P59666 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DEFA3P59666 MYO15B-237ENST00000642007 4893 ntBASIC15.27■□□□□ 0.03
DEFA3P59666 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
DEFA3P59666 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DEFA3P59666 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.27■□□□□ 0.03
DEFA3P59666 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DEFA3P59666 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
DEFA3P59666 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 KRT8P9-201ENST00000558927 1449 ntBASIC15.26■□□□□ 0.03
DEFA3P59666 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.26■□□□□ 0.03
DEFA3P59666 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
DEFA3P59666 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.26■□□□□ 0.03
DEFA3P59666 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
DEFA3P59666 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.26■□□□□ 0.03
DEFA3P59666 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.26■□□□□ 0.03
DEFA3P59666 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.26■□□□□ 0.03
DEFA3P59666 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.26■□□□□ 0.03
DEFA3P59666 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.26■□□□□ 0.03
DEFA3P59666 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
DEFA3P59666 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.26■□□□□ 0.03
DEFA3P59666 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DEFA3P59666 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.26■□□□□ 0.03
DEFA3P59666 AC006058.4-201ENST00000624016 1670 ntBASIC15.25■□□□□ 0.03
DEFA3P59666 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.25■□□□□ 0.03
DEFA3P59666 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA3P59666 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA3P59666 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA3P59666 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA3P59666 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
DEFA3P59666 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
DEFA3P59666 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA3P59666 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA3P59666 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
DEFA3P59666 AK1-201ENST00000223836 736 ntTSL 3 BASIC15.25■□□□□ 0.03
DEFA3P59666 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA3P59666 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.25■□□□□ 0.03
DEFA3P59666 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA3P59666 KRT18P11-201ENST00000435214 1283 ntBASIC15.25■□□□□ 0.03
DEFA3P59666 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA3P59666 OR10C1-204ENST00000622521 1039 ntBASIC15.25■□□□□ 0.03
DEFA3P59666 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.25■□□□□ 0.03
DEFA3P59666 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
DEFA3P59666 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA3P59666 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA3P59666 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA3P59666 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA3P59666 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.25■□□□□ 0.03
DEFA3P59666 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA3P59666 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.25■□□□□ 0.03
DEFA3P59666 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA3P59666 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA3P59666 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA3P59666 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA3P59666 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.25■□□□□ 0.03
DEFA3P59666 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DEFA3P59666 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms