Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CDH15P55291 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH15P55291 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH15P55291 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH15P55291 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH15P55291 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH15P55291 MIR149-201ENST00000384879 89 ntBASIC16.26■□□□□ 0.19
CDH15P55291 AC004980.1-204ENST00000429707 299 ntBASIC16.26■□□□□ 0.19
CDH15P55291 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
CDH15P55291 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.26■□□□□ 0.19
CDH15P55291 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH15P55291 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH15P55291 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH15P55291 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH15P55291 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CDH15P55291 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.26■□□□□ 0.19
CDH15P55291 AC010947.1-201ENST00000623454 693 ntBASIC16.26■□□□□ 0.19
CDH15P55291 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH15P55291 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH15P55291 CYP2D8P-201ENST00000433633 1490 ntBASIC16.26■□□□□ 0.19
CDH15P55291 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH15P55291 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CDH15P55291 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH15P55291 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDH15P55291 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH15P55291 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH15P55291 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH15P55291 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH15P55291 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH15P55291 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH15P55291 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH15P55291 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH15P55291 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH15P55291 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH15P55291 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH15P55291 LYSMD4-203ENST00000378904 2122 ntBASIC16.25■□□□□ 0.19
CDH15P55291 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.25■□□□□ 0.19
CDH15P55291 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH15P55291 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH15P55291 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH15P55291 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CDH15P55291 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH15P55291 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
CDH15P55291 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH15P55291 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH15P55291 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH15P55291 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH15P55291 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CDH15P55291 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH15P55291 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH15P55291 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH15P55291 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH15P55291 AC004951.3-201ENST00000418645 1148 ntBASIC16.25■□□□□ 0.19
CDH15P55291 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
CDH15P55291 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH15P55291 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH15P55291 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH15P55291 AL049597.2-201ENST00000565575 961 ntBASIC16.25■□□□□ 0.19
CDH15P55291 AL590326.2-201ENST00000625139 305 ntBASIC16.25■□□□□ 0.19
CDH15P55291 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CDH15P55291 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH15P55291 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH15P55291 AC078925.2-201ENST00000624013 1973 ntBASIC16.25■□□□□ 0.19
CDH15P55291 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH15P55291 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH15P55291 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH15P55291 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH15P55291 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH15P55291 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CDH15P55291 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH15P55291 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH15P55291 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH15P55291 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH15P55291 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH15P55291 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH15P55291 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CDH15P55291 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH15P55291 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH15P55291 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH15P55291 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH15P55291 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH15P55291 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH15P55291 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH15P55291 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH15P55291 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH15P55291 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH15P55291 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH15P55291 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH15P55291 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH15P55291 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CDH15P55291 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CDH15P55291 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH15P55291 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH15P55291 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH15P55291 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH15P55291 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH15P55291 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.24■□□□□ 0.19
CDH15P55291 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.24■□□□□ 0.19
CDH15P55291 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH15P55291 KRT18P35-201ENST00000510488 1269 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms