Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC6A4P31645 MIR940-201ENST00000401276 94 ntBASIC17.8■□□□□ 0.44
SLC6A4P31645 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A4P31645 AC108073.2-201ENST00000464002 357 ntBASIC17.8■□□□□ 0.44
SLC6A4P31645 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A4P31645 IGHV3-65-201ENST00000523210 341 ntBASIC17.8■□□□□ 0.44
SLC6A4P31645 KRT18P58-201ENST00000527480 1120 ntBASIC17.8■□□□□ 0.44
SLC6A4P31645 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
SLC6A4P31645 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A4P31645 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A4P31645 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SLC6A4P31645 AC140113.2-201ENST00000604370 208 ntBASIC17.8■□□□□ 0.44
SLC6A4P31645 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.8■□□□□ 0.44
SLC6A4P31645 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC6A4P31645 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A4P31645 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
SLC6A4P31645 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A4P31645 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC6A4P31645 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A4P31645 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SLC6A4P31645 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A4P31645 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A4P31645 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A4P31645 LINC00896-202ENST00000609602 2128 ntBASIC17.8■□□□□ 0.44
SLC6A4P31645 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SLC6A4P31645 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A4P31645 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC6A4P31645 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC6A4P31645 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A4P31645 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A4P31645 AL138688.1-201ENST00000624851 1594 ntBASIC17.79■□□□□ 0.44
SLC6A4P31645 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SLC6A4P31645 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC6A4P31645 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC6A4P31645 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SLC6A4P31645 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A4P31645 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A4P31645 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A4P31645 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
SLC6A4P31645 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC6A4P31645 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A4P31645 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
SLC6A4P31645 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC6A4P31645 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A4P31645 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A4P31645 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A4P31645 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A4P31645 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A4P31645 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC6A4P31645 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC6A4P31645 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A4P31645 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A4P31645 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A4P31645 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A4P31645 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A4P31645 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC6A4P31645 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC6A4P31645 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A4P31645 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SLC6A4P31645 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
SLC6A4P31645 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A4P31645 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SLC6A4P31645 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A4P31645 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A4P31645 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A4P31645 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A4P31645 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC6A4P31645 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SLC6A4P31645 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.78■□□□□ 0.44
SLC6A4P31645 AC007967.2-201ENST00000432613 625 ntBASIC17.78■□□□□ 0.44
SLC6A4P31645 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.78■□□□□ 0.44
SLC6A4P31645 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.78■□□□□ 0.44
SLC6A4P31645 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC6A4P31645 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SLC6A4P31645 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A4P31645 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SLC6A4P31645 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC6A4P31645 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SLC6A4P31645 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A4P31645 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A4P31645 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC6A4P31645 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC6A4P31645 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC6A4P31645 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A4P31645 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SLC6A4P31645 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A4P31645 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A4P31645 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SLC6A4P31645 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A4P31645 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A4P31645 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SLC6A4P31645 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SLC6A4P31645 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A4P31645 AP002414.1-201ENST00000391405 1147 ntBASIC17.77■□□□□ 0.44
SLC6A4P31645 SLC25A1P3-201ENST00000395415 828 ntBASIC17.77■□□□□ 0.44
SLC6A4P31645 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A4P31645 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SLC6A4P31645 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.77■□□□□ 0.44
SLC6A4P31645 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.77■□□□□ 0.44
SLC6A4P31645 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms