Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 AL138781.2-201ENST00000617896 1843 ntBASIC20.03■□□□□ 0.8
SSC5DA1L4H1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 GK-202ENST00000378941 458 ntTSL 3 BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 SPDYE7P-202ENST00000420373 878 ntBASIC20.03■□□□□ 0.8
SSC5DA1L4H1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSC5DA1L4H1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSC5DA1L4H1 AC098818.2-201ENST00000564925 2320 ntBASIC20.02■□□□□ 0.8
SSC5DA1L4H1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSC5DA1L4H1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.02■□□□□ 0.8
SSC5DA1L4H1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSC5DA1L4H1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SSC5DA1L4H1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SSC5DA1L4H1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SSC5DA1L4H1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.02■□□□□ 0.8
SSC5DA1L4H1 WASH6P-202ENST00000359512 1437 ntBASIC20.02■□□□□ 0.8
SSC5DA1L4H1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.02■□□□□ 0.8
SSC5DA1L4H1 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSC5DA1L4H1 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSC5DA1L4H1 IGHV3-62-201ENST00000520057 340 ntBASIC20.02■□□□□ 0.8
SSC5DA1L4H1 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSC5DA1L4H1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSC5DA1L4H1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SSC5DA1L4H1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SSC5DA1L4H1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SSC5DA1L4H1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SSC5DA1L4H1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 AC012569.1-201ENST00000591191 1524 ntBASIC20.01■□□□□ 0.79
SSC5DA1L4H1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 LYSMD4-203ENST00000378904 2122 ntBASIC20.01■□□□□ 0.79
SSC5DA1L4H1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 SPDYE22P-201ENST00000582158 798 ntBASIC20.01■□□□□ 0.79
SSC5DA1L4H1 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 SLC22A20-204ENST00000530038 1673 ntBASIC20.01■□□□□ 0.79
SSC5DA1L4H1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SSC5DA1L4H1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSC5DA1L4H1 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SSC5DA1L4H1 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20■□□□□ 0.79
SSC5DA1L4H1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSC5DA1L4H1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
SSC5DA1L4H1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20■□□□□ 0.79
SSC5DA1L4H1 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSC5DA1L4H1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SSC5DA1L4H1 RNU1-129P-201ENST00000384064 167 ntBASIC20■□□□□ 0.79
SSC5DA1L4H1 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC20■□□□□ 0.79
SSC5DA1L4H1 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20■□□□□ 0.79
SSC5DA1L4H1 U1.21-201ENST00000580816 167 ntBASIC20■□□□□ 0.79
SSC5DA1L4H1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SSC5DA1L4H1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20■□□□□ 0.79
SSC5DA1L4H1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20■□□□□ 0.79
SSC5DA1L4H1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSC5DA1L4H1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSC5DA1L4H1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSC5DA1L4H1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms