Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.27■□□□□ 0.2
TRBV5-3A0A0A0MS03 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.27■□□□□ 0.2
TRBV5-3A0A0A0MS03 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV5-3A0A0A0MS03 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.27■□□□□ 0.2
TRBV5-3A0A0A0MS03 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.27■□□□□ 0.2
TRBV5-3A0A0A0MS03 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.27■□□□□ 0.2
TRBV5-3A0A0A0MS03 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.27■□□□□ 0.2
TRBV5-3A0A0A0MS03 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.27■□□□□ 0.19
TRBV5-3A0A0A0MS03 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.27■□□□□ 0.19
TRBV5-3A0A0A0MS03 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV5-3A0A0A0MS03 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV5-3A0A0A0MS03 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV5-3A0A0A0MS03 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV5-3A0A0A0MS03 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV5-3A0A0A0MS03 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV5-3A0A0A0MS03 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.27■□□□□ 0.19
TRBV5-3A0A0A0MS03 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 AC026691.1-201ENST00000602502 2017 ntBASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 AL645929.1-201ENST00000420084 975 ntBASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 AC073912.3-201ENST00000624414 853 ntBASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 AC066615.1-201ENST00000640911 628 ntBASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 BCL2-203ENST00000589955 5011 ntBASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 AC132938.5-201ENST00000624980 1813 ntBASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TRBV5-3A0A0A0MS03 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 GPR89P-201ENST00000407924 1495 ntBASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 TSPY22P-201ENST00000427496 604 ntBASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 AC063952.2-201ENST00000498792 1227 ntBASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 AC124864.1-201ENST00000623408 392 ntBASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-3A0A0A0MS03 PCDHB17P-201ENST00000539533 2393 ntBASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms