Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNFT1Q5M7Z0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 AC135050.7-201ENST00000624508 2218 ntBASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 RHOQP3-201ENST00000437982 621 ntBASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 KRT19P2-202ENST00000557173 1012 ntBASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 AL596442.2-201ENST00000610240 980 ntBASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 C20orf181-201ENST00000623918 480 ntBASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 AC079781.4-201ENST00000641908 219 ntBASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 BCAR1-209ENST00000546196 1340 ntBASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNFT1Q5M7Z0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 AC006116.8-202ENST00000587620 1550 ntBASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 HTR5BP-201ENST00000430851 1154 ntBASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 AP006288.1-201ENST00000446065 395 ntBASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 LINC00304-203ENST00000565008 1864 ntBASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.62■□□□□ 0.09
RNFT1Q5M7Z0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 PDPK2P-202ENST00000562415 1191 ntBASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 LINC01451-201ENST00000623792 534 ntBASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.61■□□□□ 0.09
RNFT1Q5M7Z0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms