Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.61□□□□□ -0.07
ABCA1O95477 AC093512.1-201ENST00000617969 520 ntBASIC14.61□□□□□ -0.07
ABCA1O95477 AP000867.4-201ENST00000641616 219 ntBASIC14.61□□□□□ -0.07
ABCA1O95477 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCA1O95477 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.6□□□□□ -0.07
ABCA1O95477 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
ABCA1O95477 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ABCA1O95477 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.6□□□□□ -0.07
ABCA1O95477 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCA1O95477 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCA1O95477 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCA1O95477 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ABCA1O95477 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCA1O95477 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
ABCA1O95477 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.6□□□□□ -0.07
ABCA1O95477 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCA1O95477 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCA1O95477 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ABCA1O95477 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.6□□□□□ -0.07
ABCA1O95477 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.6□□□□□ -0.07
ABCA1O95477 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ABCA1O95477 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.6□□□□□ -0.07
ABCA1O95477 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ABCA1O95477 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCA1O95477 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.6□□□□□ -0.07
ABCA1O95477 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.6□□□□□ -0.07
ABCA1O95477 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.6□□□□□ -0.07
ABCA1O95477 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.6□□□□□ -0.07
ABCA1O95477 AC011467.4-201ENST00000594891 528 ntBASIC14.6□□□□□ -0.07
ABCA1O95477 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.6□□□□□ -0.07
ABCA1O95477 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ABCA1O95477 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.6□□□□□ -0.07
ABCA1O95477 AC132938.6-201ENST00000623828 1655 ntBASIC14.6□□□□□ -0.07
ABCA1O95477 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ABCA1O95477 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.6□□□□□ -0.07
ABCA1O95477 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ABCA1O95477 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ABCA1O95477 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.59□□□□□ -0.07
ABCA1O95477 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCA1O95477 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.59□□□□□ -0.07
ABCA1O95477 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.59□□□□□ -0.07
ABCA1O95477 AC064836.3-201ENST00000607928 673 ntBASIC14.59□□□□□ -0.07
ABCA1O95477 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
ABCA1O95477 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.59□□□□□ -0.07
ABCA1O95477 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 NCF1C-201ENST00000438382 1427 ntBASIC14.59□□□□□ -0.07
ABCA1O95477 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 ELL2P1-201ENST00000413990 1906 ntBASIC14.59□□□□□ -0.07
ABCA1O95477 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
ABCA1O95477 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
ABCA1O95477 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.59□□□□□ -0.07
ABCA1O95477 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCA1O95477 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCA1O95477 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCA1O95477 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.59□□□□□ -0.07
ABCA1O95477 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.59□□□□□ -0.07
ABCA1O95477 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.59□□□□□ -0.07
ABCA1O95477 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCA1O95477 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
ABCA1O95477 AL096865.1-201ENST00000606796 927 ntBASIC14.59□□□□□ -0.07
ABCA1O95477 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ABCA1O95477 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.59□□□□□ -0.07
ABCA1O95477 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCA1O95477 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCA1O95477 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA1O95477 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
ABCA1O95477 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ABCA1O95477 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.58□□□□□ -0.07
ABCA1O95477 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
ABCA1O95477 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ABCA1O95477 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.58□□□□□ -0.07
ABCA1O95477 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ABCA1O95477 AC135776.1-201ENST00000319817 2481 ntBASIC14.58□□□□□ -0.07
ABCA1O95477 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.58□□□□□ -0.08
ABCA1O95477 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.58□□□□□ -0.08
ABCA1O95477 PRSS29P-201ENST00000440800 595 ntBASIC14.58□□□□□ -0.08
ABCA1O95477 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ABCA1O95477 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms