Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNB4O00305 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.21■□□□□ 0.35
CACNB4O00305 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CACNB4O00305 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNB4O00305 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNB4O00305 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CACNB4O00305 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNB4O00305 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CACNB4O00305 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.21■□□□□ 0.35
CACNB4O00305 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.21■□□□□ 0.35
CACNB4O00305 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNB4O00305 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNB4O00305 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.21■□□□□ 0.35
CACNB4O00305 AC073621.1-201ENST00000392730 636 ntBASIC17.21■□□□□ 0.35
CACNB4O00305 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNB4O00305 MIR940-201ENST00000401276 94 ntBASIC17.21■□□□□ 0.35
CACNB4O00305 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.21■□□□□ 0.35
CACNB4O00305 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CACNB4O00305 UNC93B6-202ENST00000528242 690 ntBASIC17.21■□□□□ 0.35
CACNB4O00305 TERC-201ENST00000602385 541 ntBASIC17.21■□□□□ 0.35
CACNB4O00305 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.21■□□□□ 0.35
CACNB4O00305 AL139424.1-201ENST00000607572 797 ntBASIC17.21■□□□□ 0.35
CACNB4O00305 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.21■□□□□ 0.35
CACNB4O00305 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.21■□□□□ 0.35
CACNB4O00305 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNB4O00305 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CACNB4O00305 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CACNB4O00305 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
CACNB4O00305 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CACNB4O00305 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
CACNB4O00305 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.21■□□□□ 0.34
CACNB4O00305 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.34
CACNB4O00305 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CACNB4O00305 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CACNB4O00305 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
CACNB4O00305 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNB4O00305 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNB4O00305 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNB4O00305 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CACNB4O00305 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNB4O00305 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.2■□□□□ 0.34
CACNB4O00305 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CACNB4O00305 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CACNB4O00305 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNB4O00305 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.2■□□□□ 0.34
CACNB4O00305 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CACNB4O00305 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CACNB4O00305 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.2■□□□□ 0.34
CACNB4O00305 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.2■□□□□ 0.34
CACNB4O00305 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNB4O00305 ELK2BP-201ENST00000415014 1224 ntBASIC17.2■□□□□ 0.34
CACNB4O00305 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.2■□□□□ 0.34
CACNB4O00305 POLD2P1-201ENST00000511220 997 ntBASIC17.2■□□□□ 0.34
CACNB4O00305 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CACNB4O00305 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.2■□□□□ 0.34
CACNB4O00305 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.2■□□□□ 0.34
CACNB4O00305 AC027601.4-201ENST00000611259 610 ntBASIC17.2■□□□□ 0.34
CACNB4O00305 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.2■□□□□ 0.34
CACNB4O00305 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNB4O00305 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNB4O00305 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.2■□□□□ 0.34
CACNB4O00305 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.2■□□□□ 0.34
CACNB4O00305 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNB4O00305 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNB4O00305 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CACNB4O00305 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CACNB4O00305 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CACNB4O00305 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CACNB4O00305 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNB4O00305 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNB4O00305 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNB4O00305 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CACNB4O00305 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CACNB4O00305 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CACNB4O00305 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.19■□□□□ 0.34
CACNB4O00305 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNB4O00305 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNB4O00305 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNB4O00305 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.19■□□□□ 0.34
CACNB4O00305 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CACNB4O00305 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNB4O00305 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CACNB4O00305 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.19■□□□□ 0.34
CACNB4O00305 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.19■□□□□ 0.34
CACNB4O00305 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.19■□□□□ 0.34
CACNB4O00305 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.19■□□□□ 0.34
CACNB4O00305 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.19■□□□□ 0.34
CACNB4O00305 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
CACNB4O00305 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.19■□□□□ 0.34
CACNB4O00305 AC034105.1-201ENST00000563488 319 ntBASIC17.19■□□□□ 0.34
CACNB4O00305 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.19■□□□□ 0.34
CACNB4O00305 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.19■□□□□ 0.34
CACNB4O00305 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNB4O00305 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNB4O00305 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNB4O00305 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNB4O00305 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNB4O00305 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNB4O00305 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.19■□□□□ 0.34
CACNB4O00305 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms