Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 MIR1233-2-201ENST00000408138 82 ntBASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 MIR1233-1-201ENST00000408722 82 ntBASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AC012317.2-201ENST00000623305 2251 ntBASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AL390961.4-201ENST00000623958 2535 ntBASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 VN2R19P-201ENST00000442399 1052 ntBASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AC002347.1-201ENST00000569543 541 ntBASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AC010654.1-201ENST00000615722 808 ntBASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AC004790.2-201ENST00000623588 572 ntBASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 DNAJB3-201ENST00000446806 729 ntBASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
C1QTNF3-AMACRE9PGA6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.39■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 PI4KAP1-204ENST00000612579 1703 ntBASIC17.39■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms