Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 AP002414.3-201ENST00000589352 1468 ntBASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 AC097637.2-201ENST00000624096 1997 ntBASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VAT1LQ9HCJ6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
VAT1LQ9HCJ6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 HLA-J-201ENST00000462773 1622 ntBASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 AL022342.1-201ENST00000400363 863 ntBASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 BX640515.1-201ENST00000617215 977 ntBASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VAT1LQ9HCJ6 NOC2LP2-201ENST00000407594 1944 ntBASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 SLC25A1P1-201ENST00000528351 927 ntBASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 AC105339.3-201ENST00000560043 636 ntBASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 AL139327.4-201ENST00000612362 153 ntBASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 AC008735.5-201ENST00000623544 497 ntBASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 AF228730.7-201ENST00000641842 219 ntBASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
VAT1LQ9HCJ6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 LYSMD4-203ENST00000378904 2122 ntBASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
VAT1LQ9HCJ6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms