Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 DBET-201ENST00000630918 3363 ntBASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 RN7SL471P-201ENST00000580476 299 ntBASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 AC010240.3-201ENST00000607688 395 ntBASIC16.77■□□□□ 0.28
CLPTM1LQ96KA5 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CLPTM1LQ96KA5 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLPTM1LQ96KA5 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLPTM1LQ96KA5 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLPTM1LQ96KA5 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLPTM1LQ96KA5 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLPTM1LQ96KA5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.77■□□□□ 0.27
CLPTM1LQ96KA5 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.77■□□□□ 0.27
CLPTM1LQ96KA5 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CLPTM1LQ96KA5 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.77■□□□□ 0.27
CLPTM1LQ96KA5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.77■□□□□ 0.27
CLPTM1LQ96KA5 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.77■□□□□ 0.27
CLPTM1LQ96KA5 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLPTM1LQ96KA5 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 RNA5SP413-201ENST00000516373 109 ntBASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 AC093525.9-201ENST00000624961 1746 ntBASIC16.76■□□□□ 0.27
CLPTM1LQ96KA5 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.75■□□□□ 0.27
CLPTM1LQ96KA5 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CLPTM1LQ96KA5 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1LQ96KA5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1LQ96KA5 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLPTM1LQ96KA5 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLPTM1LQ96KA5 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.75■□□□□ 0.27
CLPTM1LQ96KA5 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLPTM1LQ96KA5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.75■□□□□ 0.27
CLPTM1LQ96KA5 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1LQ96KA5 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1LQ96KA5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1LQ96KA5 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1LQ96KA5 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1LQ96KA5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms