Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 HBZP1-201ENST00000354915 429 ntBASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 AC117947.1-201ENST00000427448 529 ntBASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 AC097374.2-201ENST00000618617 1306 ntBASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ATP6AP1LQ52LC2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 COX5BP2-201ENST00000392354 334 ntBASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 RNF152P1-201ENST00000397754 604 ntBASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 AL390719.2-201ENST00000606993 987 ntBASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP6AP1LQ52LC2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms