Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5BP61020 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5BP61020 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
RAB5BP61020 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RAB5BP61020 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RAB5BP61020 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5BP61020 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5BP61020 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5BP61020 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5BP61020 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5BP61020 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RAB5BP61020 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5BP61020 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5BP61020 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB5BP61020 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RAB5BP61020 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB5BP61020 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5BP61020 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5BP61020 GPAT2P1-201ENST00000444924 1672 ntBASIC13.66□□□□□ -0.22
RAB5BP61020 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5BP61020 AC005089.1-201ENST00000619486 2241 ntBASIC13.66□□□□□ -0.22
RAB5BP61020 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
RAB5BP61020 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
RAB5BP61020 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.65□□□□□ -0.22
RAB5BP61020 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
RAB5BP61020 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RAB5BP61020 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB5BP61020 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 MIR572-201ENST00000384983 95 ntBASIC13.65□□□□□ -0.22
RAB5BP61020 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RAB5BP61020 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB5BP61020 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB5BP61020 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC13.65□□□□□ -0.22
RAB5BP61020 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB5BP61020 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RAB5BP61020 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RAB5BP61020 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB5BP61020 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.65□□□□□ -0.22
RAB5BP61020 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
RAB5BP61020 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB5BP61020 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.65□□□□□ -0.23
RAB5BP61020 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
RAB5BP61020 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB5BP61020 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
RAB5BP61020 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB5BP61020 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB5BP61020 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RAB5BP61020 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RAB5BP61020 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB5BP61020 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB5BP61020 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB5BP61020 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB5BP61020 AC067750.1-201ENST00000608826 6545 ntBASIC13.64□□□□□ -0.23
RAB5BP61020 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RAB5BP61020 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB5BP61020 AC092364.2-201ENST00000596710 2692 ntBASIC13.64□□□□□ -0.23
RAB5BP61020 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC13.64□□□□□ -0.23
RAB5BP61020 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB5BP61020 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB5BP61020 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB5BP61020 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.64□□□□□ -0.23
RAB5BP61020 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.64□□□□□ -0.23
RAB5BP61020 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC13.64□□□□□ -0.23
RAB5BP61020 SLC7A5P1-201ENST00000568957 537 ntBASIC13.64□□□□□ -0.23
RAB5BP61020 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB5BP61020 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB5BP61020 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB5BP61020 AL035685.1-201ENST00000636663 812 ntBASIC13.64□□□□□ -0.23
RAB5BP61020 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB5BP61020 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB5BP61020 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.64□□□□□ -0.23
RAB5BP61020 AC124283.5-201ENST00000624661 1809 ntBASIC13.64□□□□□ -0.23
RAB5BP61020 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB5BP61020 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB5BP61020 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB5BP61020 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RAB5BP61020 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB5BP61020 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB5BP61020 AC023908.3-201ENST00000564211 3047 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms