Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPT1AP50416 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPT1AP50416 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPT1AP50416 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPT1AP50416 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPT1AP50416 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.21■□□□□ 0.67
CPT1AP50416 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPT1AP50416 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPT1AP50416 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CPT1AP50416 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.21■□□□□ 0.67
CPT1AP50416 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.21■□□□□ 0.67
CPT1AP50416 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.21■□□□□ 0.67
CPT1AP50416 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.21■□□□□ 0.67
CPT1AP50416 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPT1AP50416 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPT1AP50416 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CPT1AP50416 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.21■□□□□ 0.67
CPT1AP50416 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPT1AP50416 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPT1AP50416 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.21■□□□□ 0.67
CPT1AP50416 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPT1AP50416 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPT1AP50416 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPT1AP50416 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPT1AP50416 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPT1AP50416 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CPT1AP50416 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
CPT1AP50416 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPT1AP50416 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPT1AP50416 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.2■□□□□ 0.66
CPT1AP50416 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPT1AP50416 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CPT1AP50416 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPT1AP50416 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.2■□□□□ 0.66
CPT1AP50416 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.2■□□□□ 0.66
CPT1AP50416 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.2■□□□□ 0.66
CPT1AP50416 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.2■□□□□ 0.66
CPT1AP50416 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CPT1AP50416 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPT1AP50416 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CPT1AP50416 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CPT1AP50416 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPT1AP50416 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.2■□□□□ 0.66
CPT1AP50416 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPT1AP50416 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPT1AP50416 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.2■□□□□ 0.66
CPT1AP50416 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPT1AP50416 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPT1AP50416 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
CPT1AP50416 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.2■□□□□ 0.66
CPT1AP50416 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.19■□□□□ 0.66
CPT1AP50416 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CPT1AP50416 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.19■□□□□ 0.66
CPT1AP50416 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPT1AP50416 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPT1AP50416 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPT1AP50416 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CPT1AP50416 AC023141.5-201ENST00000458585 616 ntBASIC19.19■□□□□ 0.66
CPT1AP50416 HLA-J-203ENST00000494367 1087 ntBASIC19.19■□□□□ 0.66
CPT1AP50416 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.19■□□□□ 0.66
CPT1AP50416 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.19■□□□□ 0.66
CPT1AP50416 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.19■□□□□ 0.66
CPT1AP50416 AC025678.2-201ENST00000562061 970 ntBASIC19.19■□□□□ 0.66
CPT1AP50416 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.19■□□□□ 0.66
CPT1AP50416 AC092364.2-202ENST00000597012 1073 ntBASIC19.19■□□□□ 0.66
CPT1AP50416 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.19■□□□□ 0.66
CPT1AP50416 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.19■□□□□ 0.66
CPT1AP50416 AL645728.2-201ENST00000641974 660 ntBASIC19.19■□□□□ 0.66
CPT1AP50416 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CPT1AP50416 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CPT1AP50416 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPT1AP50416 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPT1AP50416 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPT1AP50416 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
CPT1AP50416 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CPT1AP50416 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPT1AP50416 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPT1AP50416 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.19■□□□□ 0.66
CPT1AP50416 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPT1AP50416 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPT1AP50416 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPT1AP50416 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CPT1AP50416 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.18■□□□□ 0.66
CPT1AP50416 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPT1AP50416 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.18■□□□□ 0.66
CPT1AP50416 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CPT1AP50416 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPT1AP50416 FAM8A3P-201ENST00000427218 844 ntBASIC19.18■□□□□ 0.66
CPT1AP50416 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.18■□□□□ 0.66
CPT1AP50416 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.18■□□□□ 0.66
CPT1AP50416 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CPT1AP50416 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPT1AP50416 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPT1AP50416 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPT1AP50416 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.18■□□□□ 0.66
CPT1AP50416 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPT1AP50416 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPT1AP50416 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPT1AP50416 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPT1AP50416 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms