Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
ALX3O95076 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.48■□□□□ 0.07
ALX3O95076 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ALX3O95076 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.48■□□□□ 0.07
ALX3O95076 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
ALX3O95076 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ALX3O95076 LYSMD4-203ENST00000378904 2122 ntBASIC15.48■□□□□ 0.07
ALX3O95076 AP000523.1-201ENST00000398242 1049 ntBASIC15.48■□□□□ 0.07
ALX3O95076 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.48■□□□□ 0.07
ALX3O95076 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.48■□□□□ 0.07
ALX3O95076 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.48■□□□□ 0.07
ALX3O95076 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.48■□□□□ 0.07
ALX3O95076 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
ALX3O95076 AL355075.4-201ENST00000554988 638 ntBASIC15.48■□□□□ 0.07
ALX3O95076 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
ALX3O95076 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.48■□□□□ 0.07
ALX3O95076 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
ALX3O95076 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ALX3O95076 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.48■□□□□ 0.07
ALX3O95076 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.48■□□□□ 0.07
ALX3O95076 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ALX3O95076 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ALX3O95076 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
ALX3O95076 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
ALX3O95076 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ALX3O95076 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ALX3O95076 AC022188.1-201ENST00000620960 1664 ntBASIC15.48■□□□□ 0.07
ALX3O95076 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.47■□□□□ 0.07
ALX3O95076 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
ALX3O95076 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.47■□□□□ 0.07
ALX3O95076 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
ALX3O95076 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.47■□□□□ 0.07
ALX3O95076 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
ALX3O95076 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
ALX3O95076 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 HMGA1P5-201ENST00000412453 271 ntBASIC15.47■□□□□ 0.07
ALX3O95076 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.47■□□□□ 0.07
ALX3O95076 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.47■□□□□ 0.07
ALX3O95076 LINC00167-201ENST00000530583 1419 ntBASIC15.47■□□□□ 0.07
ALX3O95076 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.47■□□□□ 0.07
ALX3O95076 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.47■□□□□ 0.07
ALX3O95076 AL049597.2-201ENST00000565575 961 ntBASIC15.47■□□□□ 0.07
ALX3O95076 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.47■□□□□ 0.07
ALX3O95076 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.47■□□□□ 0.07
ALX3O95076 AC116407.2-201ENST00000613639 860 ntBASIC15.47■□□□□ 0.07
ALX3O95076 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
ALX3O95076 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.47■□□□□ 0.07
ALX3O95076 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
ALX3O95076 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.47■□□□□ 0.07
ALX3O95076 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.47■□□□□ 0.07
ALX3O95076 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ALX3O95076 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ALX3O95076 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ALX3O95076 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ALX3O95076 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ALX3O95076 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
ALX3O95076 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ALX3O95076 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ALX3O95076 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ALX3O95076 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ALX3O95076 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.46■□□□□ 0.07
ALX3O95076 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.46■□□□□ 0.07
ALX3O95076 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.46■□□□□ 0.07
ALX3O95076 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
ALX3O95076 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
ALX3O95076 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.46■□□□□ 0.07
ALX3O95076 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ALX3O95076 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.46■□□□□ 0.07
ALX3O95076 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
ALX3O95076 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
ALX3O95076 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ALX3O95076 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.46■□□□□ 0.07
ALX3O95076 AC009947.2-201ENST00000444014 672 ntBASIC15.46■□□□□ 0.07
ALX3O95076 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ALX3O95076 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.46■□□□□ 0.07
ALX3O95076 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.46■□□□□ 0.07
ALX3O95076 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
ALX3O95076 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.46■□□□□ 0.07
ALX3O95076 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms