Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 AC132872.4-202ENST00000622924 2756 ntBASIC16.55■□□□□ 0.24
AP4S1Q9Y587 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 HYMAI-201ENST00000635591 3347 ntBASIC16.55■□□□□ 0.24
AP4S1Q9Y587 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.55■□□□□ 0.24
AP4S1Q9Y587 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 AF186192.3-201ENST00000583427 947 ntBASIC16.54■□□□□ 0.24
AP4S1Q9Y587 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 AC092053.1-201ENST00000605787 1936 ntBASIC16.54■□□□□ 0.24
AP4S1Q9Y587 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4S1Q9Y587 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 WWOX-216ENST00000569818 525 ntBASIC16.53■□□□□ 0.24
AP4S1Q9Y587 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 AL662844.4-201ENST00000606367 2838 ntBASIC16.53■□□□□ 0.24
AP4S1Q9Y587 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms