Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 PI4KAP1-204ENST00000612579 1703 ntBASIC20.36■□□□□ 0.85
CDK5RAP2Q96SN8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CDK5RAP2Q96SN8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.36■□□□□ 0.85
CDK5RAP2Q96SN8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK5RAP2Q96SN8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDK5RAP2Q96SN8 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK5RAP2Q96SN8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.36■□□□□ 0.85
CDK5RAP2Q96SN8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.36■□□□□ 0.85
CDK5RAP2Q96SN8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDK5RAP2Q96SN8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK5RAP2Q96SN8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.36■□□□□ 0.85
CDK5RAP2Q96SN8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDK5RAP2Q96SN8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 FAM58CP-201ENST00000435741 640 ntBASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 AC096734.2-201ENST00000562054 433 ntBASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP2Q96SN8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 AC068880.1-201ENST00000507289 2297 ntBASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.34■□□□□ 0.85
CDK5RAP2Q96SN8 AC025580.3-201ENST00000617932 1424 ntBASIC20.33■□□□□ 0.85
CDK5RAP2Q96SN8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CDK5RAP2Q96SN8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
CDK5RAP2Q96SN8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.33■□□□□ 0.85
CDK5RAP2Q96SN8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.33■□□□□ 0.85
CDK5RAP2Q96SN8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.33■□□□□ 0.85
CDK5RAP2Q96SN8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.33■□□□□ 0.85
CDK5RAP2Q96SN8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDK5RAP2Q96SN8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDK5RAP2Q96SN8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
CDK5RAP2Q96SN8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDK5RAP2Q96SN8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDK5RAP2Q96SN8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CDK5RAP2Q96SN8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.33■□□□□ 0.84
CDK5RAP2Q96SN8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDK5RAP2Q96SN8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDK5RAP2Q96SN8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDK5RAP2Q96SN8 CNN2P11-201ENST00000429351 262 ntBASIC20.33■□□□□ 0.84
CDK5RAP2Q96SN8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.33■□□□□ 0.84
CDK5RAP2Q96SN8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.84
CDK5RAP2Q96SN8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDK5RAP2Q96SN8 AL596442.2-201ENST00000610240 980 ntBASIC20.33■□□□□ 0.84
CDK5RAP2Q96SN8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK5RAP2Q96SN8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms