Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PAX9P55771 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PAX9P55771 PKD1P1-201ENST00000458669 6805 ntBASIC14.04□□□□□ -0.16
PAX9P55771 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PAX9P55771 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PAX9P55771 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.04□□□□□ -0.16
PAX9P55771 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PAX9P55771 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PAX9P55771 AL596257.1-201ENST00000641463 2694 ntBASIC14.04□□□□□ -0.16
PAX9P55771 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PAX9P55771 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
PAX9P55771 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.04□□□□□ -0.16
PAX9P55771 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.04□□□□□ -0.16
PAX9P55771 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.04□□□□□ -0.16
PAX9P55771 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PAX9P55771 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
PAX9P55771 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.03□□□□□ -0.16
PAX9P55771 AL513523.2-202ENST00000427283 2040 ntBASIC14.03□□□□□ -0.16
PAX9P55771 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.03□□□□□ -0.16
PAX9P55771 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.03□□□□□ -0.16
PAX9P55771 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PAX9P55771 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 MIR718-201ENST00000390190 70 ntBASIC14.03□□□□□ -0.16
PAX9P55771 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.03□□□□□ -0.16
PAX9P55771 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.03□□□□□ -0.16
PAX9P55771 AC112698.1-201ENST00000510299 916 ntBASIC14.03□□□□□ -0.16
PAX9P55771 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.03□□□□□ -0.16
PAX9P55771 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.03□□□□□ -0.16
PAX9P55771 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.03□□□□□ -0.16
PAX9P55771 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.03□□□□□ -0.16
PAX9P55771 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PAX9P55771 AC026471.5-201ENST00000615068 467 ntBASIC14.03□□□□□ -0.16
PAX9P55771 AL157888.1-201ENST00000631930 593 ntBASIC14.03□□□□□ -0.16
PAX9P55771 AC092865.7-201ENST00000641832 219 ntBASIC14.03□□□□□ -0.16
PAX9P55771 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.03□□□□□ -0.16
PAX9P55771 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.03□□□□□ -0.16
PAX9P55771 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 AC022188.1-201ENST00000620960 1664 ntBASIC14.03□□□□□ -0.16
PAX9P55771 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.03□□□□□ -0.16
PAX9P55771 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.03□□□□□ -0.16
PAX9P55771 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.03□□□□□ -0.16
PAX9P55771 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.03□□□□□ -0.16
PAX9P55771 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.03□□□□□ -0.16
PAX9P55771 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PAX9P55771 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PAX9P55771 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
PAX9P55771 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PAX9P55771 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.02□□□□□ -0.16
PAX9P55771 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PAX9P55771 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PAX9P55771 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PAX9P55771 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PAX9P55771 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PAX9P55771 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PAX9P55771 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
PAX9P55771 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PAX9P55771 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.02□□□□□ -0.16
PAX9P55771 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
PAX9P55771 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PAX9P55771 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PAX9P55771 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PAX9P55771 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PAX9P55771 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
PAX9P55771 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.02□□□□□ -0.17
PAX9P55771 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PAX9P55771 AC009947.2-201ENST00000444014 672 ntBASIC14.02□□□□□ -0.17
PAX9P55771 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.02□□□□□ -0.17
PAX9P55771 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.02□□□□□ -0.17
PAX9P55771 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
PAX9P55771 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.02□□□□□ -0.17
PAX9P55771 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.02□□□□□ -0.17
PAX9P55771 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.02□□□□□ -0.17
PAX9P55771 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.02□□□□□ -0.17
PAX9P55771 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PAX9P55771 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
PAX9P55771 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PAX9P55771 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PAX9P55771 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PAX9P55771 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
PAX9P55771 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms