Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
O00370 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.63■□□□□ 0.57
O00370 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
O00370 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
O00370 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.63■□□□□ 0.57
O00370 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
O00370 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
O00370 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.63■□□□□ 0.57
O00370 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.63■□□□□ 0.57
O00370 AC091304.2-201ENST00000564639 760 ntBASIC18.63■□□□□ 0.57
O00370 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.63■□□□□ 0.57
O00370 BCL2-203ENST00000589955 5011 ntBASIC18.63■□□□□ 0.57
O00370 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
O00370 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
O00370 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
O00370 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.63■□□□□ 0.57
O00370 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
O00370 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
O00370 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
O00370 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
O00370 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
O00370 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
O00370 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
O00370 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
O00370 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.63■□□□□ 0.57
O00370 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
O00370 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.63■□□□□ 0.57
O00370 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
O00370 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
O00370 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
O00370 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
O00370 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
O00370 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
O00370 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
O00370 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
O00370 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
O00370 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
O00370 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
O00370 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
O00370 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
O00370 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.62■□□□□ 0.57
O00370 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
O00370 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.62■□□□□ 0.57
O00370 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.62■□□□□ 0.57
O00370 AC132008.2-207ENST00000454517 770 ntBASIC18.62■□□□□ 0.57
O00370 IGHV3-52-201ENST00000519770 353 ntBASIC18.62■□□□□ 0.57
O00370 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.62■□□□□ 0.57
O00370 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.62■□□□□ 0.57
O00370 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
O00370 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.62■□□□□ 0.57
O00370 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
O00370 AP000867.4-201ENST00000641616 219 ntBASIC18.62■□□□□ 0.57
O00370 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
O00370 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
O00370 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
O00370 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
O00370 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
O00370 PMPCAP1-201ENST00000508114 1576 ntBASIC18.62■□□□□ 0.57
O00370 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
O00370 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.62■□□□□ 0.57
O00370 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
O00370 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
O00370 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
O00370 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.62■□□□□ 0.57
O00370 CROCCP2-202ENST00000412962 2773 ntBASIC18.62■□□□□ 0.57
O00370 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
O00370 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
O00370 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
O00370 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
O00370 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
O00370 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
O00370 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
O00370 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
O00370 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
O00370 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
O00370 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.61■□□□□ 0.57
O00370 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
O00370 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.61■□□□□ 0.57
O00370 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
O00370 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
O00370 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.61■□□□□ 0.57
O00370 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
O00370 AC132938.5-201ENST00000624980 1813 ntBASIC18.61■□□□□ 0.57
O00370 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.61■□□□□ 0.57
O00370 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.61■□□□□ 0.57
O00370 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
O00370 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.61■□□□□ 0.57
O00370 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.61■□□□□ 0.57
O00370 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
O00370 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
O00370 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
O00370 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
O00370 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.61■□□□□ 0.57
O00370 ABCD1P5-201ENST00000445663 754 ntBASIC18.61■□□□□ 0.57
O00370 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.61■□□□□ 0.57
O00370 AC111152.3-201ENST00000569699 673 ntBASIC18.61■□□□□ 0.57
O00370 STK25P1-201ENST00000585406 838 ntBASIC18.61■□□□□ 0.57
O00370 AP001269.4-201ENST00000609611 512 ntBASIC18.61■□□□□ 0.57
O00370 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
O00370 AL139327.4-201ENST00000612362 153 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms