Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 APLP2-211ENST00000529235 537 ntTSL 422.84■■□□□ 1.251e-12■□□□□ 10.3
DROSHAQ9NRR4 TRIM11-206ENST00000602582 682 ntTSL 322.62■■□□□ 1.213e-6■□□□□ 10.3
DROSHAQ9NRR4 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.193e-6■□□□□ 10.3
DROSHAQ9NRR4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC22.47■■□□□ 1.193e-6■□□□□ 10.3
DROSHAQ9NRR4 KLHL22-212ENST00000494929 550 ntTSL 422.44■■□□□ 1.183e-6■□□□□ 10.3
DROSHAQ9NRR4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC22.37■■□□□ 1.173e-6■□□□□ 10.3
DROSHAQ9NRR4 KLHL22-204ENST00000443285 792 ntTSL 422.07■■□□□ 1.123e-6■□□□□ 10.3
DROSHAQ9NRR4 USP3-205ENST00000557884 958 ntTSL 321.87■■□□□ 1.093e-6■□□□□ 10.3
DROSHAQ9NRR4 USP3-221ENST00000561442 542 ntTSL 521.87■■□□□ 1.093e-6■□□□□ 10.3
DROSHAQ9NRR4 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.093e-6■□□□□ 10.3
DROSHAQ9NRR4 MED24-213ENST00000535071 2441 ntTSL 521.62■■□□□ 1.053e-6■□□□□ 10.3
DROSHAQ9NRR4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.033e-6■□□□□ 10.3
DROSHAQ9NRR4 KLHL22-209ENST00000479601 1389 ntTSL 521.3■■□□□ 13e-6■□□□□ 10.3
DROSHAQ9NRR4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.913e-6■□□□□ 10.3
DROSHAQ9NRR4 PTPRF-202ENST00000372405 1962 ntTSL 1 (best)20.76■□□□□ 0.919e-9■□□□□ 10.3
DROSHAQ9NRR4 CRCP-206ENST00000486848 458 ntTSL 220.59■□□□□ 0.893e-6■□□□□ 10.3
DROSHAQ9NRR4 STXBP2-204ENST00000593535 549 ntTSL 420.35■□□□□ 0.853e-6■□□□□ 10.3
DROSHAQ9NRR4 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC20.18■□□□□ 0.823e-6■□□□□ 10.3
DROSHAQ9NRR4 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.83e-6■□□□□ 10.3
DROSHAQ9NRR4 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.763e-6■□□□□ 10.3
DROSHAQ9NRR4 NDRG2-258ENST00000556716 2718 ntTSL 219.29■□□□□ 0.683e-6■□□□□ 10.3
DROSHAQ9NRR4 CRCP-202ENST00000360415 3139 ntTSL 1 (best)19.23■□□□□ 0.673e-6■□□□□ 10.3
DROSHAQ9NRR4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.633e-6■□□□□ 10.3
DROSHAQ9NRR4 PTPRF-208ENST00000437607 788 ntTSL 1 (best)18.98■□□□□ 0.633e-6■□□□□ 10.3
DROSHAQ9NRR4 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61e-12■□□□□ 10.3
DROSHAQ9NRR4 KLHL22-206ENST00000451553 724 ntTSL 318.77■□□□□ 0.63e-6■□□□□ 10.3
DROSHAQ9NRR4 INTS6-207ENST00000469430 3767 ntTSL 218.69■□□□□ 0.583e-6■□□□□ 10.3
DROSHAQ9NRR4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.574e-6■□□□□ 10.3
DROSHAQ9NRR4 KLHL22-202ENST00000423364 769 ntTSL 318.51■□□□□ 0.553e-6■□□□□ 10.3
DROSHAQ9NRR4 HSPB11-204ENST00000371378 894 ntTSL 3 BASIC18.49■□□□□ 0.553e-6■□□□□ 10.3
DROSHAQ9NRR4 SNF8-207ENST00000509995 560 ntTSL 318.28■□□□□ 0.523e-6■□□□□ 10.3
DROSHAQ9NRR4 NDRG2-274ENST00000557633 527 ntTSL 318.03■□□□□ 0.483e-6■□□□□ 10.3
DROSHAQ9NRR4 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.473e-6■□□□□ 10.3
DROSHAQ9NRR4 USP3-202ENST00000380324 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.433e-6■□□□□ 10.3
DROSHAQ9NRR4 STXBP2-207ENST00000595181 632 ntTSL 217.7■□□□□ 0.423e-6■□□□□ 10.3
DROSHAQ9NRR4 MED24-212ENST00000501516 3037 ntTSL 5 BASIC17.69■□□□□ 0.423e-6■□□□□ 10.3
DROSHAQ9NRR4 USP3-204ENST00000540797 5474 ntTSL 2 BASIC17.33■□□□□ 0.363e-6■□□□□ 10.3
DROSHAQ9NRR4 MED24-214ENST00000535508 3334 ntTSL 217.25■□□□□ 0.353e-6■□□□□ 10.3
DROSHAQ9NRR4 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.241e-12■□□□□ 10.3
DROSHAQ9NRR4 AC068533.4-201ENST00000450043 922 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.213e-6■□□□□ 10.3
DROSHAQ9NRR4 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.213e-6■□□□□ 10.3
DROSHAQ9NRR4 HSPB11-203ENST00000371377 760 ntTSL 1 (best) BASIC16.22■□□□□ 0.193e-6■□□□□ 10.3
DROSHAQ9NRR4 SNF8-201ENST00000290330 951 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.183e-6■□□□□ 10.3
DROSHAQ9NRR4 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC15.81■□□□□ 0.123e-6■□□□□ 10.3
DROSHAQ9NRR4 ACSL3-204ENST00000413316 650 ntTSL 415.75■□□□□ 0.113e-6■□□□□ 10.3
DROSHAQ9NRR4 MED24-201ENST00000356271 3446 ntTSL 2 BASIC15.72■□□□□ 0.113e-6■□□□□ 10.3
DROSHAQ9NRR4 USP3-219ENST00000561326 543 ntTSL 415.55■□□□□ 0.083e-6■□□□□ 10.3
DROSHAQ9NRR4 USP3-216ENST00000559873 584 ntTSL 515.4■□□□□ 0.063e-6■□□□□ 10.3
DROSHAQ9NRR4 USP3-206ENST00000558157 2439 ntTSL 1 (best)15.34■□□□□ 0.053e-6■□□□□ 10.3
DROSHAQ9NRR4 MED24-203ENST00000394127 3456 ntTSL 2 BASIC14.9□□□□□ -0.023e-6■□□□□ 10.3
DROSHAQ9NRR4 MED24-231ENST00000584782 542 ntTSL 314.5□□□□□ -0.093e-6■□□□□ 10.3
DROSHAQ9NRR4 SNF8-211ENST00000512243 863 ntTSL 214.34□□□□□ -0.113e-6■□□□□ 10.3
DROSHAQ9NRR4 MED24-202ENST00000394126 3896 ntTSL 1 (best) BASIC14.32□□□□□ -0.123e-6■□□□□ 10.3
DROSHAQ9NRR4 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.243e-6■□□□□ 10.3
DROSHAQ9NRR4 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC13.38□□□□□ -0.273e-6■□□□□ 10.3
DROSHAQ9NRR4 INTS6-209ENST00000483288 597 ntTSL 413.28□□□□□ -0.283e-6■□□□□ 10.3
DROSHAQ9NRR4 MED24-219ENST00000578901 728 ntTSL 1 (best)13.22□□□□□ -0.293e-6■□□□□ 10.3
DROSHAQ9NRR4 MED24-228ENST00000581058 524 ntTSL 413.18□□□□□ -0.33e-6■□□□□ 10.3
DROSHAQ9NRR4 USP3-217ENST00000560070 545 ntTSL 412.91□□□□□ -0.343e-6■□□□□ 10.3
DROSHAQ9NRR4 MED15P9-201ENST00000424716 533 ntBASIC12.02□□□□□ -0.493e-6■□□□□ 10.3
DROSHAQ9NRR4 HSPB11-205ENST00000488884 463 ntTSL 29.4□□□□□ -0.93e-6■□□□□ 10.3
DROSHAQ9NRR4 USP3-210ENST00000559192 5499 ntTSL 1 (best)8.98□□□□□ -0.973e-6■□□□□ 10.3
DROSHAQ9NRR4 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.48□□□□□ -1.053e-6■□□□□ 10.3
DROSHAQ9NRR4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC7.66□□□□□ -1.183e-6■□□□□ 10.3
DROSHAQ9NRR4 INTS6-212ENST00000485178 474 ntTSL 57□□□□□ -1.293e-6■□□□□ 10.3
DROSHAQ9NRR4 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.87□□□□□ -1.313e-6■□□□□ 10.3
DROSHAQ9NRR4 DNM2-210ENST00000587830 868 ntTSL 517.28■□□□□ 0.369e-7■□□□□ 10.3
DROSHAQ9NRR4 PIP4K2B-203ENST00000617781 927 ntTSL 218.71■□□□□ 0.593e-12■□□□□ 10.3
DROSHAQ9NRR4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC32.67■■■□□ 2.822e-7■□□□□ 10.3
DROSHAQ9NRR4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC27.42■■□□□ 1.982e-7■□□□□ 10.3
DROSHAQ9NRR4 HNF4A-207ENST00000609262 540 ntTSL 1 (best)27.38■■□□□ 1.972e-7■□□□□ 10.3
DROSHAQ9NRR4 HNF4A-203ENST00000372920 3340 ntTSL 1 (best)25.58■■□□□ 1.682e-7■□□□□ 10.3
DROSHAQ9NRR4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC23.45■■□□□ 1.342e-7■□□□□ 10.3
DROSHAQ9NRR4 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC20.03■□□□□ 0.82e-7■□□□□ 10.3
DROSHAQ9NRR4 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC19.24■□□□□ 0.672e-7■□□□□ 10.3
DROSHAQ9NRR4 HNF4A-201ENST00000316099 6445 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.092e-7■□□□□ 10.3
DROSHAQ9NRR4 HNF4A-209ENST00000619550 4763 ntTSL 5 BASIC13.51□□□□□ -0.252e-7■□□□□ 10.3
DROSHAQ9NRR4 DNM2-222ENST00000593220 561 ntTSL 322.84■■□□□ 1.254e-7■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-230ENST00000629955 1435 ntTSL 521.46■■□□□ 1.032e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-231ENST00000630572 468 ntTSL 520.87■□□□□ 0.932e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-202ENST00000392861 1514 ntTSL 1 (best)19.91■□□□□ 0.782e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.722e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-214ENST00000462355 656 ntTSL 4 BASIC17.74■□□□□ 0.432e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-237ENST00000636732 5073 ntTSL 517.13■□□□□ 0.332e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.312e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-235ENST00000636445 2947 ntTSL 515.76■□□□□ 0.112e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-209ENST00000435831 554 ntTSL 415.59■□□□□ 0.092e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-220ENST00000476394 601 ntTSL 315.42■□□□□ 0.062e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-207ENST00000431672 709 ntTSL 415.31■□□□□ 0.042e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-217ENST00000470879 2648 ntTSL 1 (best) BASIC15.03■□□□□ -02e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-229ENST00000629520 2564 ntTSL 2 BASIC14.51□□□□□ -0.092e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-224ENST00000539609 4061 ntTSL 2 BASIC14.36□□□□□ -0.112e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-212ENST00000453352 581 ntTSL 314.03□□□□□ -0.162e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-222ENST00000484313 845 ntTSL 1 (best)13.31□□□□□ -0.282e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-208ENST00000434448 583 ntTSL 512.65□□□□□ -0.382e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-216ENST00000465308 1071 ntTSL 512.65□□□□□ -0.382e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-215ENST00000465070 2949 ntTSL 2 BASIC12.59□□□□□ -0.392e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-201ENST00000303660 3913 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.432e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-205ENST00000419938 1755 ntTSL 2 BASIC12.08□□□□□ -0.482e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-210ENST00000440875 1809 ntTSL 5 BASIC11.42□□□□□ -0.582e-6■□□□□ 10.3
Retrieved 100 of 16,331 protein–RNA pairs in 67.5 ms