RNA–Protein interactions for RNA: ENST00000636445.1

ZEB2-235, Transcript of zinc finger E-box binding homeobox 2, humanhuman

TSL 5

Gene ZEB2, Length 2,947 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-235ENST00000636445 NISCHQ9Y2I1 1504 aa22.9■■□□□ 1.26
ZEB2-235ENST00000636445 CCDC180Q9P1Z9 1646 aa19.64■□□□□ 0.73
ZEB2-235ENST00000636445 ZCCHC6Q5VYS8 1495 aaKnown RBP19.35■□□□□ 0.69
ZEB2-235ENST00000636445 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
ZEB2-235ENST00000636445 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
ZEB2-235ENST00000636445 DCAF1Q9Y4B6 1507 aa18.87■□□□□ 0.61
ZEB2-235ENST00000636445 SUPT5HO00267 1087 aaKnown RBP18.79■□□□□ 0.6
ZEB2-235ENST00000636445 MYO15BQ96JP2 1530 aa18.42■□□□□ 0.54
ZEB2-235ENST00000636445 SCRIBQ14160 1630 aa18.25■□□□□ 0.51
ZEB2-235ENST00000636445 ABCC9O60706 1549 aa18.23■□□□□ 0.51
ZEB2-235ENST00000636445 CHIC1Q5VXU3 224 aa18.23■□□□□ 0.51
ZEB2-235ENST00000636445 NACADO15069 1562 aa18.18■□□□□ 0.5
ZEB2-235ENST00000636445 RSF1Q96T23 1441 aaPredicted RBP18.01■□□□□ 0.47
ZEB2-235ENST00000636445 RB1CC1Q8TDY2 1594 aa17.9■□□□□ 0.46
ZEB2-235ENST00000636445 CECR2Q9BXF3 1484 aa17.8■□□□□ 0.44
ZEB2-235ENST00000636445 MROH2BQ7Z745 1585 aa17.75■□□□□ 0.43
ZEB2-235ENST00000636445 WIZO95785 1651 aa17.65■□□□□ 0.42
ZEB2-235ENST00000636445 BAZ1AQ9NRL2 1556 aaPredicted RBP17.63■□□□□ 0.41
ZEB2-235ENST00000636445 LOC105371045A0A1W2PR82 267 aa17.61■□□□□ 0.41
ZEB2-235ENST00000636445 UNC13AQ9UPW8 1703 aa17.61■□□□□ 0.41
ZEB2-235ENST00000636445 TRIM41Q8WV44 630 aa17.58■□□□□ 0.41
ZEB2-235ENST00000636445 SMARCA4P51532 1647 aa17.49■□□□□ 0.39
ZEB2-235ENST00000636445 PCGF6Q9BYE7 350 aa17.44■□□□□ 0.38
ZEB2-235ENST00000636445 TOP2AP11388 1531 aaKnown RBP17.42■□□□□ 0.38
ZEB2-235ENST00000636445 EIF4G1Q04637 1599 aaKnown RBP17.37■□□□□ 0.37
ZEB2-235ENST00000636445 BICRAQ9NZM4 1560 aa17.37■□□□□ 0.37
ZEB2-235ENST00000636445 HRCP23327 699 aa17.36■□□□□ 0.37
ZEB2-235ENST00000636445 FAM9AQ8IZU1 332 aaPredicted RBP17.33■□□□□ 0.37
ZEB2-235ENST00000636445 SMARCA2P51531 1590 aa17.3■□□□□ 0.36
ZEB2-235ENST00000636445 PABPN1Q86U42 306 aaKnown RBP eCLIP17.3■□□□□ 0.36
ZEB2-235ENST00000636445 CCDC88BA6NC98 1476 aa17.29■□□□□ 0.36
ZEB2-235ENST00000636445 TRIM26Q12899 539 aaPredicted RBP17.24■□□□□ 0.35
ZEB2-235ENST00000636445 PEG3Q9GZU2 1588 aa17.21■□□□□ 0.35
ZEB2-235ENST00000636445 ABCC8Q09428 1581 aa17.16■□□□□ 0.34
ZEB2-235ENST00000636445 EHMT2Q96KQ7 1210 aa17.12■□□□□ 0.33
ZEB2-235ENST00000636445 ATAD2BQ9ULI0 1458 aa17.06■□□□□ 0.32
ZEB2-235ENST00000636445 BAZ1BQ9UIG0 1483 aaKnown RBP17.01■□□□□ 0.31
ZEB2-235ENST00000636445 EEA1Q15075 1411 aa16.97■□□□□ 0.31
ZEB2-235ENST00000636445 SOGA1O94964 1423 aa16.95■□□□□ 0.3
ZEB2-235ENST00000636445 WRNQ14191 1432 aaPredicted RBP eCLIP16.95■□□□□ 0.3
ZEB2-235ENST00000636445 PPARGC1BQ86YN6 1023 aaKnown RBP16.93■□□□□ 0.3
ZEB2-235ENST00000636445 CSRNP3Q8WYN3 585 aa16.87■□□□□ 0.29
ZEB2-235ENST00000636445 RUSC2Q8N2Y8 1516 aa16.86■□□□□ 0.29
ZEB2-235ENST00000636445 SYNJ1O43426 1573 aa16.85■□□□□ 0.29
ZEB2-235ENST00000636445 TNIKQ9UKE5 1360 aa16.85■□□□□ 0.29
ZEB2-235ENST00000636445 CEP162Q5TB80 1403 aa16.83■□□□□ 0.29
ZEB2-235ENST00000636445 ZEB1P37275 1124 aaPredicted RBP16.83■□□□□ 0.28
ZEB2-235ENST00000636445 HMGXB3Q12766 1538 aa16.8■□□□□ 0.28
ZEB2-235ENST00000636445 GOLGA3Q08378 1498 aa16.79■□□□□ 0.28
ZEB2-235ENST00000636445 NCAPD3P42695 1498 aa16.79■□□□□ 0.28
ZEB2-235ENST00000636445 UBTFP17480 764 aaKnown RBP16.76■□□□□ 0.27
ZEB2-235ENST00000636445 CEP164Q9UPV0 1460 aa16.73■□□□□ 0.27
ZEB2-235ENST00000636445 KIF21BO75037 1637 aa16.72■□□□□ 0.27
ZEB2-235ENST00000636445 TOP2BQ02880 1626 aa16.72■□□□□ 0.27
ZEB2-235ENST00000636445 BIVM-ERCC5R4GMW8 1640 aa16.67■□□□□ 0.26
ZEB2-235ENST00000636445 CFTRP13569 1480 aa16.6■□□□□ 0.25
ZEB2-235ENST00000636445 RAPGEF2Q9Y4G8 1499 aa16.58■□□□□ 0.24
ZEB2-235ENST00000636445 CLIP1P30622 1438 aa16.56■□□□□ 0.24
ZEB2-235ENST00000636445 TTBK1Q5TCY1 1321 aaPredicted RBP16.55■□□□□ 0.24
ZEB2-235ENST00000636445 CUX1P39880 1505 aa16.55■□□□□ 0.24
ZEB2-235ENST00000636445 PRDM2Q13029 1718 aa16.52■□□□□ 0.24
ZEB2-235ENST00000636445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
ZEB2-235ENST00000636445 ERICH3Q5RHP9 1530 aa16.5■□□□□ 0.23
ZEB2-235ENST00000636445 CCER1Q8TC90 406 aaPredicted RBP16.49■□□□□ 0.23
ZEB2-235ENST00000636445 VPS8Q8N3P4 1428 aa16.49■□□□□ 0.23
ZEB2-235ENST00000636445 PRXQ9BXM0 1461 aa16.48■□□□□ 0.23
ZEB2-235ENST00000636445 KIF27Q86VH2 1401 aa16.46■□□□□ 0.23
ZEB2-235ENST00000636445 CADPSQ9ULU8 1353 aa16.43■□□□□ 0.22
ZEB2-235ENST00000636445 CC2D2AQ9P2K1 1620 aa16.43■□□□□ 0.22
ZEB2-235ENST00000636445 APLP2Q06481 763 aa16.39■□□□□ 0.21
ZEB2-235ENST00000636445 RANGAP1P46060 587 aaPredicted RBP16.38■□□□□ 0.21
ZEB2-235ENST00000636445 ARAP1Q96P48 1450 aa16.31■□□□□ 0.2
ZEB2-235ENST00000636445 CUX2O14529 1486 aa16.3■□□□□ 0.2
ZEB2-235ENST00000636445 FGD5Q6ZNL6 1462 aa16.29■□□□□ 0.2
ZEB2-235ENST00000636445 FANCD2Q9BXW9 1451 aa16.26■□□□□ 0.19
ZEB2-235ENST00000636445 IGF1RP08069 1367 aa16.26■□□□□ 0.19
ZEB2-235ENST00000636445 HNRNPUL2Q1KMD3 747 aaKnown RBP16.23■□□□□ 0.19
ZEB2-235ENST00000636445 ARHGAP35Q9NRY4 1499 aa16.21■□□□□ 0.19
ZEB2-235ENST00000636445 DNMBPQ6XZF7 1577 aa16.19■□□□□ 0.18
ZEB2-235ENST00000636445 CARMIL1Q5VZK9 1371 aa16.19■□□□□ 0.18
ZEB2-235ENST00000636445 NESP48681 1621 aa16.14■□□□□ 0.17
ZEB2-235ENST00000636445 KANK4Q5T7N3 995 aaPredicted RBP16.14■□□□□ 0.17
ZEB2-235ENST00000636445 TOPBP1Q92547 1522 aa16.14■□□□□ 0.17
ZEB2-235ENST00000636445 ABCA10Q8WWZ4 1543 aa16.13■□□□□ 0.17
ZEB2-235ENST00000636445 LAMC3Q9Y6N6 1575 aa16.13■□□□□ 0.17
ZEB2-235ENST00000636445 POLA1P09884 1462 aaPredicted RBP16.12■□□□□ 0.17
ZEB2-235ENST00000636445 RAD54L2Q9Y4B4 1467 aa16.1■□□□□ 0.17
ZEB2-235ENST00000636445 RRBP1Q9P2E9 1410 aaKnown RBP16.09■□□□□ 0.17
ZEB2-235ENST00000636445 DIEXFQ68CQ4 756 aaKnown RBP16.07■□□□□ 0.16
ZEB2-235ENST00000636445 MAP3K1Q13233 1512 aa16.05■□□□□ 0.16
ZEB2-235ENST00000636445 CUL7Q14999 1698 aa16.05■□□□□ 0.16
ZEB2-235ENST00000636445 TIAM1Q13009 1591 aa16.03■□□□□ 0.16
ZEB2-235ENST00000636445 FHAD1B1AJZ9 1412 aa16.02■□□□□ 0.16
ZEB2-235ENST00000636445 URB2Q14146 1524 aaKnown RBP16.02■□□□□ 0.16
ZEB2-235ENST00000636445 ZNF316A6NFI3 1004 aaPredicted RBP16.01■□□□□ 0.15
ZEB2-235ENST00000636445 CCNB3Q8WWL7 1395 aa16.01■□□□□ 0.15
ZEB2-235ENST00000636445 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
ZEB2-235ENST00000636445 CLSPNQ9HAW4 1339 aa16.01■□□□□ 0.15
ZEB2-235ENST00000636445 PDS5BQ9NTI5 1447 aa16.01■□□□□ 0.15
ZEB2-235ENST00000636445 CTTNBP2Q8WZ74 1663 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms