RNA–Protein interactions for RNA: ENST00000303660.8

ZEB2-201, Transcript of zinc finger E-box binding homeobox 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ZEB2, Length 3,913 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-201ENST00000303660 NISCHQ9Y2I1 1504 aa18.06■□□□□ 0.48
ZEB2-201ENST00000303660 DCAF8L2P0C7V8 631 aa15.82■□□□□ 0.12
ZEB2-201ENST00000303660 PELP1Q8IZL8 1130 aaKnown RBP15.82■□□□□ 0.12
ZEB2-201ENST00000303660 SHROOM4Q9ULL8 1493 aa15.6■□□□□ 0.09
ZEB2-201ENST00000303660 HRCP23327 699 aa15.58■□□□□ 0.08
ZEB2-201ENST00000303660 MYT1Q01538 1121 aa15.43■□□□□ 0.06
ZEB2-201ENST00000303660 CCDC180Q9P1Z9 1646 aa15.32■□□□□ 0.04
ZEB2-201ENST00000303660 SUPT5HO00267 1087 aaKnown RBP15.32■□□□□ 0.04
ZEB2-201ENST00000303660 PCGF6Q9BYE7 350 aa15.23■□□□□ 0.03
ZEB2-201ENST00000303660 ZCCHC6Q5VYS8 1495 aaKnown RBP15.15■□□□□ 0.02
ZEB2-201ENST00000303660 PPARGC1BQ86YN6 1023 aaKnown RBP15.08■□□□□ 0
ZEB2-201ENST00000303660 ZEB1P37275 1124 aaPredicted RBP14.91□□□□□ -0.02
ZEB2-201ENST00000303660 ABCC9O60706 1549 aa14.85□□□□□ -0.03
ZEB2-201ENST00000303660 SCAF1Q9H7N4 1312 aaKnown RBP14.74□□□□□ -0.05
ZEB2-201ENST00000303660 TRIM26Q12899 539 aaPredicted RBP14.72□□□□□ -0.05
ZEB2-201ENST00000303660 DCAF1Q9Y4B6 1507 aa14.7□□□□□ -0.06
ZEB2-201ENST00000303660 CHIC1Q5VXU3 224 aa14.69□□□□□ -0.06
ZEB2-201ENST00000303660 CENPBP07199 599 aaPredicted RBP14.63□□□□□ -0.07
ZEB2-201ENST00000303660 SCRIBQ14160 1630 aa14.54□□□□□ -0.08
ZEB2-201ENST00000303660 ACIN1Q9UKV3 1341 aaKnown RBP14.51□□□□□ -0.09
ZEB2-201ENST00000303660 MYO15BQ96JP2 1530 aa14.48□□□□□ -0.09
ZEB2-201ENST00000303660 TTBK1Q5TCY1 1321 aaPredicted RBP14.47□□□□□ -0.09
ZEB2-201ENST00000303660 NACADO15069 1562 aa14.42□□□□□ -0.1
ZEB2-201ENST00000303660 GTF3C3Q9Y5Q9 886 aa14.42□□□□□ -0.1
ZEB2-201ENST00000303660 LOC105371045A0A1W2PR82 267 aa14.37□□□□□ -0.11
ZEB2-201ENST00000303660 NEUROD1Q13562 356 aa14.33□□□□□ -0.12
ZEB2-201ENST00000303660 RB1CC1Q8TDY2 1594 aa14.31□□□□□ -0.12
ZEB2-201ENST00000303660 PABPN1Q86U42 306 aaKnown RBP eCLIP14.29□□□□□ -0.12
ZEB2-201ENST00000303660 TRIM41Q8WV44 630 aa14.28□□□□□ -0.12
ZEB2-201ENST00000303660 RSF1Q96T23 1441 aaPredicted RBP14.24□□□□□ -0.13
ZEB2-201ENST00000303660 FAM9AQ8IZU1 332 aaPredicted RBP14.23□□□□□ -0.13
ZEB2-201ENST00000303660 DIEXFQ68CQ4 756 aaKnown RBP14.21□□□□□ -0.13
ZEB2-201ENST00000303660 CCER1Q8TC90 406 aaPredicted RBP14.19□□□□□ -0.14
ZEB2-201ENST00000303660 EHMT2Q96KQ7 1210 aa14.19□□□□□ -0.14
ZEB2-201ENST00000303660 CECR2Q9BXF3 1484 aa14.14□□□□□ -0.15
ZEB2-201ENST00000303660 YTHDC1Q96MU7 727 aaKnown RBP14.05□□□□□ -0.16
ZEB2-201ENST00000303660 MROH2BQ7Z745 1585 aa14.02□□□□□ -0.17
ZEB2-201ENST00000303660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.97□□□□□ -0.17
ZEB2-201ENST00000303660 BAZ1AQ9NRL2 1556 aaPredicted RBP13.96□□□□□ -0.17
ZEB2-201ENST00000303660 BCL11AQ9H165 835 aa13.94□□□□□ -0.18
ZEB2-201ENST00000303660 ANP32EQ9BTT0 268 aa13.87□□□□□ -0.19
ZEB2-201ENST00000303660 ZNF316A6NFI3 1004 aaPredicted RBP13.87□□□□□ -0.19
ZEB2-201ENST00000303660 CLSPNQ9HAW4 1339 aa13.87□□□□□ -0.19
ZEB2-201ENST00000303660 WIZO95785 1651 aa13.86□□□□□ -0.19
ZEB2-201ENST00000303660 UBTFP17480 764 aaKnown RBP13.76□□□□□ -0.21
ZEB2-201ENST00000303660 SMARCA4P51532 1647 aa13.76□□□□□ -0.21
ZEB2-201ENST00000303660 CCDC88BA6NC98 1476 aa13.71□□□□□ -0.21
ZEB2-201ENST00000303660 TOP2AP11388 1531 aaKnown RBP13.7□□□□□ -0.22
ZEB2-201ENST00000303660 ERICH6Q7L0X2 663 aa13.68□□□□□ -0.22
ZEB2-201ENST00000303660 BAZ1BQ9UIG0 1483 aaKnown RBP13.67□□□□□ -0.22
ZEB2-201ENST00000303660 MIER1Q8N108 512 aa13.67□□□□□ -0.22
ZEB2-201ENST00000303660 BICRAQ9NZM4 1560 aa13.65□□□□□ -0.22
ZEB2-201ENST00000303660 UNC13AQ9UPW8 1703 aa13.64□□□□□ -0.23
ZEB2-201ENST00000303660 RANGAP1P46060 587 aaPredicted RBP13.63□□□□□ -0.23
ZEB2-201ENST00000303660 CSRNP3Q8WYN3 585 aa13.61□□□□□ -0.23
ZEB2-201ENST00000303660 ATAD2BQ9ULI0 1458 aa13.6□□□□□ -0.23
ZEB2-201ENST00000303660 SUPT16HQ9Y5B9 1047 aaKnown RBP13.58□□□□□ -0.23
ZEB2-201ENST00000303660 SMARCA2P51531 1590 aa13.57□□□□□ -0.24
ZEB2-201ENST00000303660 APLP2Q06481 763 aa13.56□□□□□ -0.24
ZEB2-201ENST00000303660 TSHZ2Q9NRE2 1034 aa13.56□□□□□ -0.24
ZEB2-201ENST00000303660 ABCC8Q09428 1581 aa13.56□□□□□ -0.24
ZEB2-201ENST00000303660 NEFLP07196 543 aa13.55□□□□□ -0.24
ZEB2-201ENST00000303660 WRNQ14191 1432 aaPredicted RBP eCLIP13.54□□□□□ -0.24
ZEB2-201ENST00000303660 MYT1LQ9UL68 1186 aa13.46□□□□□ -0.25
ZEB2-201ENST00000303660 SOGA1O94964 1423 aa13.46□□□□□ -0.25
ZEB2-201ENST00000303660 PRKCSHP14314 528 aaPredicted RBP13.45□□□□□ -0.26
ZEB2-201ENST00000303660 EEA1Q15075 1411 aa13.44□□□□□ -0.26
ZEB2-201ENST00000303660 BCANQ96GW7 911 aa13.41□□□□□ -0.26
ZEB2-201ENST00000303660 EIF4G1Q04637 1599 aaKnown RBP13.39□□□□□ -0.27
ZEB2-201ENST00000303660 HNRNPUL2Q1KMD3 747 aaKnown RBP13.38□□□□□ -0.27
ZEB2-201ENST00000303660 NCAPD3P42695 1498 aa13.37□□□□□ -0.27
ZEB2-201ENST00000303660 PEG3Q9GZU2 1588 aa13.37□□□□□ -0.27
ZEB2-201ENST00000303660 FKBP8Q14318 412 aa13.34□□□□□ -0.27
ZEB2-201ENST00000303660 CEP162Q5TB80 1403 aa13.33□□□□□ -0.27
ZEB2-201ENST00000303660 TNIKQ9UKE5 1360 aa13.33□□□□□ -0.27
ZEB2-201ENST00000303660 GOLGA3Q08378 1498 aa13.33□□□□□ -0.28
ZEB2-201ENST00000303660 RUSC2Q8N2Y8 1516 aa13.32□□□□□ -0.28
ZEB2-201ENST00000303660 RBM19Q9Y4C8 960 aaKnown RBP13.32□□□□□ -0.28
ZEB2-201ENST00000303660 CEP164Q9UPV0 1460 aa13.28□□□□□ -0.28
ZEB2-201ENST00000303660 ATP1B4Q9UN42 357 aaPredicted RBP13.27□□□□□ -0.28
ZEB2-201ENST00000303660 CDK11AQ9UQ88 783 aaPredicted RBP13.26□□□□□ -0.29
ZEB2-201ENST00000303660 HMGXB3Q12766 1538 aa13.25□□□□□ -0.29
ZEB2-201ENST00000303660 CLIP1P30622 1438 aa13.24□□□□□ -0.29
ZEB2-201ENST00000303660 CADPSQ9ULU8 1353 aa13.24□□□□□ -0.29
ZEB2-201ENST00000303660 KIF27Q86VH2 1401 aa13.22□□□□□ -0.29
ZEB2-201ENST00000303660 SYNJ1O43426 1573 aa13.21□□□□□ -0.29
ZEB2-201ENST00000303660 CFTRP13569 1480 aa13.17□□□□□ -0.3
ZEB2-201ENST00000303660 RTL5Q5HYW3 569 aaPredicted RBP13.14□□□□□ -0.31
ZEB2-201ENST00000303660 DEKP35659 375 aaKnown RBP13.14□□□□□ -0.31
ZEB2-201ENST00000303660 CC2D2AQ9P2K1 1620 aa13.14□□□□□ -0.31
ZEB2-201ENST00000303660 CUX2O14529 1486 aa13.13□□□□□ -0.31
ZEB2-201ENST00000303660 RAPGEF2Q9Y4G8 1499 aa13.13□□□□□ -0.31
ZEB2-201ENST00000303660 ITGAEP38570 1179 aa13.12□□□□□ -0.31
ZEB2-201ENST00000303660 P3H3Q8IVL6 736 aa13.11□□□□□ -0.31
ZEB2-201ENST00000303660 FANCIQ9NVI1 1328 aa13.11□□□□□ -0.31
ZEB2-201ENST00000303660 ERICH6BQ5W0A0 696 aa13.09□□□□□ -0.31
ZEB2-201ENST00000303660 TOP2BQ02880 1626 aa13.08□□□□□ -0.32
ZEB2-201ENST00000303660 FANCD2Q9BXW9 1451 aa13.07□□□□□ -0.32
ZEB2-201ENST00000303660 CUX1P39880 1505 aa13.06□□□□□ -0.32
ZEB2-201ENST00000303660 CARMIL1Q5VZK9 1371 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms