RNA–Protein interactions for RNA: ENST00000629955.1

ZEB2-230, Transcript of zinc finger E-box binding homeobox 2, humanhuman

TSL 5

Gene ZEB2, Length 1,435 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-230ENST00000629955 NISCHQ9Y2I1 1504 aa32.73■■■□□ 2.83
ZEB2-230ENST00000629955 CCDC180Q9P1Z9 1646 aa28.78■■■□□ 2.2
ZEB2-230ENST00000629955 ABCC9O60706 1549 aa27.45■■□□□ 1.98
ZEB2-230ENST00000629955 ZCCHC6Q5VYS8 1495 aaKnown RBP27.4■■□□□ 1.98
ZEB2-230ENST00000629955 DCAF8L2P0C7V8 631 aa27.14■■□□□ 1.93
ZEB2-230ENST00000629955 DCAF1Q9Y4B6 1507 aa27.13■■□□□ 1.93
ZEB2-230ENST00000629955 MYO15BQ96JP2 1530 aa26.98■■□□□ 1.91
ZEB2-230ENST00000629955 NACADO15069 1562 aa26.92■■□□□ 1.9
ZEB2-230ENST00000629955 RB1CC1Q8TDY2 1594 aa26.77■■□□□ 1.88
ZEB2-230ENST00000629955 SHROOM4Q9ULL8 1493 aa26.33■■□□□ 1.81
ZEB2-230ENST00000629955 SCRIBQ14160 1630 aa26.31■■□□□ 1.8
ZEB2-230ENST00000629955 UNC13AQ9UPW8 1703 aa26.08■■□□□ 1.77
ZEB2-230ENST00000629955 BICRAQ9NZM4 1560 aa25.84■■□□□ 1.73
ZEB2-230ENST00000629955 PABPN1Q86U42 306 aaKnown RBP eCLIP25.79■■□□□ 1.72
ZEB2-230ENST00000629955 CECR2Q9BXF3 1484 aa25.38■■□□□ 1.65
ZEB2-230ENST00000629955 BAZ1AQ9NRL2 1556 aaPredicted RBP25.34■■□□□ 1.65
ZEB2-230ENST00000629955 SMARCA4P51532 1647 aa25.24■■□□□ 1.63
ZEB2-230ENST00000629955 RSF1Q96T23 1441 aaPredicted RBP25.21■■□□□ 1.63
ZEB2-230ENST00000629955 MROH2BQ7Z745 1585 aa25.21■■□□□ 1.63
ZEB2-230ENST00000629955 SUPT5HO00267 1087 aaKnown RBP25.2■■□□□ 1.63
ZEB2-230ENST00000629955 EIF4G1Q04637 1599 aaKnown RBP25.13■■□□□ 1.61
ZEB2-230ENST00000629955 WIZO95785 1651 aa24.98■■□□□ 1.59
ZEB2-230ENST00000629955 SMARCA2P51531 1590 aa24.97■■□□□ 1.59
ZEB2-230ENST00000629955 PEG3Q9GZU2 1588 aa24.97■■□□□ 1.59
ZEB2-230ENST00000629955 ATAD2BQ9ULI0 1458 aa24.91■■□□□ 1.58
ZEB2-230ENST00000629955 CC2D2AQ9P2K1 1620 aa24.85■■□□□ 1.57
ZEB2-230ENST00000629955 NCAPD3P42695 1498 aa24.8■■□□□ 1.56
ZEB2-230ENST00000629955 TOP2AP11388 1531 aaKnown RBP24.79■■□□□ 1.56
ZEB2-230ENST00000629955 BAZ1BQ9UIG0 1483 aaKnown RBP24.79■■□□□ 1.56
ZEB2-230ENST00000629955 HMGXB3Q12766 1538 aa24.75■■□□□ 1.55
ZEB2-230ENST00000629955 CCDC88BA6NC98 1476 aa24.49■■□□□ 1.51
ZEB2-230ENST00000629955 DNAJC5BQ9UF47 199 aa24.46■■□□□ 1.51
ZEB2-230ENST00000629955 CADPSQ9ULU8 1353 aa24.14■■□□□ 1.45
ZEB2-230ENST00000629955 CFTRP13569 1480 aa24.12■■□□□ 1.45
ZEB2-230ENST00000629955 LAMC3Q9Y6N6 1575 aa24.05■■□□□ 1.44
ZEB2-230ENST00000629955 PRDM2Q13029 1718 aa24.01■■□□□ 1.43
ZEB2-230ENST00000629955 CHIC1Q5VXU3 224 aa23.93■■□□□ 1.42
ZEB2-230ENST00000629955 NESP48681 1621 aa23.93■■□□□ 1.42
ZEB2-230ENST00000629955 PDS5BQ9NTI5 1447 aa23.9■■□□□ 1.42
ZEB2-230ENST00000629955 FANCD2Q9BXW9 1451 aa23.85■■□□□ 1.41
ZEB2-230ENST00000629955 TRIM41Q8WV44 630 aa23.8■■□□□ 1.4
ZEB2-230ENST00000629955 ABCC8Q09428 1581 aa23.79■■□□□ 1.4
ZEB2-230ENST00000629955 WRNQ14191 1432 aaPredicted RBP eCLIP23.78■■□□□ 1.4
ZEB2-230ENST00000629955 CEP164Q9UPV0 1460 aa23.77■■□□□ 1.4
ZEB2-230ENST00000629955 KIF21AQ7Z4S6 1674 aa23.69■■□□□ 1.38
ZEB2-230ENST00000629955 ERCC6Q03468 1493 aa23.67■■□□□ 1.38
ZEB2-230ENST00000629955 TOP2BQ02880 1626 aa23.64■■□□□ 1.37
ZEB2-230ENST00000629955 SYNJ1O43426 1573 aa23.63■■□□□ 1.37
ZEB2-230ENST00000629955 BIVM-ERCC5R4GMW8 1640 aa23.62■■□□□ 1.37
ZEB2-230ENST00000629955 CUX1P39880 1505 aa23.61■■□□□ 1.37
ZEB2-230ENST00000629955 DNMBPQ6XZF7 1577 aa23.59■■□□□ 1.37
ZEB2-230ENST00000629955 MRC2Q9UBG0 1479 aa23.57■■□□□ 1.36
ZEB2-230ENST00000629955 TOPBP1Q92547 1522 aa23.54■■□□□ 1.36
ZEB2-230ENST00000629955 URB2Q14146 1524 aaKnown RBP23.53■■□□□ 1.36
ZEB2-230ENST00000629955 FGD5Q6ZNL6 1462 aa23.44■■□□□ 1.34
ZEB2-230ENST00000629955 WDR62O43379 1518 aa23.44■■□□□ 1.34
ZEB2-230ENST00000629955 THOC2Q8NI27 1593 aaKnown RBP23.41■■□□□ 1.34
ZEB2-230ENST00000629955 POLA1P09884 1462 aaPredicted RBP23.38■■□□□ 1.33
ZEB2-230ENST00000629955 SOGA1O94964 1423 aa23.35■■□□□ 1.33
ZEB2-230ENST00000629955 EEA1Q15075 1411 aa23.34■■□□□ 1.33
ZEB2-230ENST00000629955 ABCA10Q8WWZ4 1543 aa23.26■■□□□ 1.31
ZEB2-230ENST00000629955 RAD54L2Q9Y4B4 1467 aa23.26■■□□□ 1.31
ZEB2-230ENST00000629955 KIF27Q86VH2 1401 aa23.26■■□□□ 1.31
ZEB2-230ENST00000629955 FAM9AQ8IZU1 332 aaPredicted RBP23.25■■□□□ 1.31
ZEB2-230ENST00000629955 IFT140Q96RY7 1462 aa23.25■■□□□ 1.31
ZEB2-230ENST00000629955 CUX2O14529 1486 aa23.23■■□□□ 1.31
ZEB2-230ENST00000629955 TARBP1Q13395 1621 aaKnown RBP23.19■■□□□ 1.3
ZEB2-230ENST00000629955 CSRNP3Q8WYN3 585 aa23.18■■□□□ 1.3
ZEB2-230ENST00000629955 RUSC2Q8N2Y8 1516 aa23.17■■□□□ 1.3
ZEB2-230ENST00000629955 WDR97A6NE52 1622 aa23.17■■□□□ 1.3
ZEB2-230ENST00000629955 TDRD9Q8NDG6 1382 aaKnown RBP23.1■■□□□ 1.29
ZEB2-230ENST00000629955 GAPVD1Q14C86 1478 aa23.08■■□□□ 1.29
ZEB2-230ENST00000629955 ABCA5Q8WWZ7 1642 aa23.07■■□□□ 1.28
ZEB2-230ENST00000629955 IGF1RP08069 1367 aa23.03■■□□□ 1.28
ZEB2-230ENST00000629955 ERICH3Q5RHP9 1530 aa23.01■■□□□ 1.27
ZEB2-230ENST00000629955 ZNF608Q9ULD9 1512 aaPredicted RBP23■■□□□ 1.27
ZEB2-230ENST00000629955 AQRO60306 1485 aaKnown RBP eCLIP23■■□□□ 1.27
ZEB2-230ENST00000629955 GRIN2BQ13224 1484 aa22.99■■□□□ 1.27
ZEB2-230ENST00000629955 KIF21BO75037 1637 aa22.98■■□□□ 1.27
ZEB2-230ENST00000629955 EIF4G3O43432 1585 aaKnown RBP22.96■■□□□ 1.27
ZEB2-230ENST00000629955 CUL7Q14999 1698 aa22.96■■□□□ 1.27
ZEB2-230ENST00000629955 PBRM1Q86U86 1689 aa22.95■■□□□ 1.26
ZEB2-230ENST00000629955 CARMIL1Q5VZK9 1371 aa22.95■■□□□ 1.26
ZEB2-230ENST00000629955 PRXQ9BXM0 1461 aa22.95■■□□□ 1.26
ZEB2-230ENST00000629955 LOC105371045A0A1W2PR82 267 aa22.94■■□□□ 1.26
ZEB2-230ENST00000629955 GOLGA3Q08378 1498 aa22.93■■□□□ 1.26
ZEB2-230ENST00000629955 RAPGEF2Q9Y4G8 1499 aa22.89■■□□□ 1.26
ZEB2-230ENST00000629955 AEBP2Q6ZN18 517 aaPredicted RBP22.89■■□□□ 1.25
ZEB2-230ENST00000629955 EHMT2Q96KQ7 1210 aa22.88■■□□□ 1.25
ZEB2-230ENST00000629955 UBTFP17480 764 aaKnown RBP22.86■■□□□ 1.25
ZEB2-230ENST00000629955 FHAD1B1AJZ9 1412 aa22.86■■□□□ 1.25
ZEB2-230ENST00000629955 MAGI1Q96QZ7 1491 aaPredicted RBP22.84■■□□□ 1.25
ZEB2-230ENST00000629955 SNAPC4Q5SXM2 1469 aa22.82■■□□□ 1.24
ZEB2-230ENST00000629955 ADAMTS12P58397 1594 aa22.8■■□□□ 1.24
ZEB2-230ENST00000629955 TNIKQ9UKE5 1360 aa22.79■■□□□ 1.24
ZEB2-230ENST00000629955 SYNJ2O15056 1496 aa22.73■■□□□ 1.23
ZEB2-230ENST00000629955 CHMP7Q8WUX9 453 aaPredicted RBP22.73■■□□□ 1.23
ZEB2-230ENST00000629955 FBLN2P98095 1184 aa22.66■■□□□ 1.22
ZEB2-230ENST00000629955 GRIN2AQ12879 1464 aa22.66■■□□□ 1.22
ZEB2-230ENST00000629955 CTTNBP2Q8WZ74 1663 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms