RNA–Protein interactions for RNA: ENST00000453352.5

ZEB2-212, Transcript of zinc finger E-box binding homeobox 2, humanhuman

TSL 3

Gene ZEB2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-212ENST00000453352 NISCHQ9Y2I1 1504 aa22.2■■□□□ 1.14
ZEB2-212ENST00000453352 ABCC9O60706 1549 aa20.38■□□□□ 0.85
ZEB2-212ENST00000453352 CCDC180Q9P1Z9 1646 aa20.17■□□□□ 0.82
ZEB2-212ENST00000453352 DNAJC5BQ9UF47 199 aa19.47■□□□□ 0.71
ZEB2-212ENST00000453352 RB1CC1Q8TDY2 1594 aa19.32■□□□□ 0.68
ZEB2-212ENST00000453352 NACADO15069 1562 aa19.11■□□□□ 0.65
ZEB2-212ENST00000453352 UNC13AQ9UPW8 1703 aa18.96■□□□□ 0.63
ZEB2-212ENST00000453352 PABPN1Q86U42 306 aaKnown RBP eCLIP18.84■□□□□ 0.61
ZEB2-212ENST00000453352 BICRAQ9NZM4 1560 aa18.81■□□□□ 0.6
ZEB2-212ENST00000453352 MYO15BQ96JP2 1530 aa18.79■□□□□ 0.6
ZEB2-212ENST00000453352 DCAF8L2P0C7V8 631 aa18.65■□□□□ 0.58
ZEB2-212ENST00000453352 SHROOM4Q9ULL8 1493 aa18.57■□□□□ 0.56
ZEB2-212ENST00000453352 CC2D2AQ9P2K1 1620 aa18.47■□□□□ 0.55
ZEB2-212ENST00000453352 CECR2Q9BXF3 1484 aa18.44■□□□□ 0.54
ZEB2-212ENST00000453352 DCAF1Q9Y4B6 1507 aa18.39■□□□□ 0.54
ZEB2-212ENST00000453352 EIF4G1Q04637 1599 aaKnown RBP18.35■□□□□ 0.53
ZEB2-212ENST00000453352 ZCCHC6Q5VYS8 1495 aaKnown RBP18.33■□□□□ 0.53
ZEB2-212ENST00000453352 SCRIBQ14160 1630 aa18.23■□□□□ 0.51
ZEB2-212ENST00000453352 DNAJC5Q9H3Z4 198 aa18.19■□□□□ 0.5
ZEB2-212ENST00000453352 CUX2O14529 1486 aa17.82■□□□□ 0.44
ZEB2-212ENST00000453352 NCAPD3P42695 1498 aa17.64■□□□□ 0.41
ZEB2-212ENST00000453352 ERCC6Q03468 1493 aa17.62■□□□□ 0.41
ZEB2-212ENST00000453352 HMGXB3Q12766 1538 aa17.51■□□□□ 0.39
ZEB2-212ENST00000453352 ATAD2BQ9ULI0 1458 aa17.5■□□□□ 0.39
ZEB2-212ENST00000453352 SMARCA2P51531 1590 aa17.45■□□□□ 0.38
ZEB2-212ENST00000453352 NESP48681 1621 aa17.43■□□□□ 0.38
ZEB2-212ENST00000453352 THOC2Q8NI27 1593 aaKnown RBP17.42■□□□□ 0.38
ZEB2-212ENST00000453352 SMARCA4P51532 1647 aa17.42■□□□□ 0.38
ZEB2-212ENST00000453352 LAMC3Q9Y6N6 1575 aa17.32■□□□□ 0.36
ZEB2-212ENST00000453352 PEG3Q9GZU2 1588 aa17.32■□□□□ 0.36
ZEB2-212ENST00000453352 BAZ1BQ9UIG0 1483 aaKnown RBP17.28■□□□□ 0.36
ZEB2-212ENST00000453352 BAZ1AQ9NRL2 1556 aaPredicted RBP17.27■□□□□ 0.35
ZEB2-212ENST00000453352 KIF21AQ7Z4S6 1674 aa17.26■□□□□ 0.35
ZEB2-212ENST00000453352 PDS5BQ9NTI5 1447 aa17.16■□□□□ 0.34
ZEB2-212ENST00000453352 TRIM41Q8WV44 630 aa17.09■□□□□ 0.33
ZEB2-212ENST00000453352 WDR62O43379 1518 aa17.08■□□□□ 0.32
ZEB2-212ENST00000453352 MROH2BQ7Z745 1585 aa17.07■□□□□ 0.32
ZEB2-212ENST00000453352 MRC2Q9UBG0 1479 aa17.05■□□□□ 0.32
ZEB2-212ENST00000453352 CADPSQ9ULU8 1353 aa17.03■□□□□ 0.32
ZEB2-212ENST00000453352 CEP164Q9UPV0 1460 aa16.9■□□□□ 0.3
ZEB2-212ENST00000453352 WIZO95785 1651 aa16.86■□□□□ 0.29
ZEB2-212ENST00000453352 FANCD2Q9BXW9 1451 aa16.84■□□□□ 0.29
ZEB2-212ENST00000453352 OSCARQ8IYS5 282 aa16.83■□□□□ 0.28
ZEB2-212ENST00000453352 CFTRP13569 1480 aa16.8■□□□□ 0.28
ZEB2-212ENST00000453352 RIMBP3CA6NJZ7 1639 aa16.75■□□□□ 0.27
ZEB2-212ENST00000453352 RIMBP3BA6NNM3 1639 aa16.75■□□□□ 0.27
ZEB2-212ENST00000453352 RIMBP3Q9UFD9 1639 aa16.75■□□□□ 0.27
ZEB2-212ENST00000453352 URB2Q14146 1524 aaKnown RBP16.75■□□□□ 0.27
ZEB2-212ENST00000453352 PRDM2Q13029 1718 aa16.68■□□□□ 0.26
ZEB2-212ENST00000453352 ARHGEF11O15085 1522 aa16.65■□□□□ 0.26
ZEB2-212ENST00000453352 TOP2AP11388 1531 aaKnown RBP16.64■□□□□ 0.25
ZEB2-212ENST00000453352 IFT140Q96RY7 1462 aa16.59■□□□□ 0.25
ZEB2-212ENST00000453352 ZNF608Q9ULD9 1512 aaPredicted RBP16.58■□□□□ 0.24
ZEB2-212ENST00000453352 RSF1Q96T23 1441 aaPredicted RBP16.56■□□□□ 0.24
ZEB2-212ENST00000453352 EIF4G3O43432 1585 aaKnown RBP16.52■□□□□ 0.24
ZEB2-212ENST00000453352 TOPBP1Q92547 1522 aa16.5■□□□□ 0.23
ZEB2-212ENST00000453352 CHD1O14646 1710 aa16.48■□□□□ 0.23
ZEB2-212ENST00000453352 ARAP1Q96P48 1450 aa16.45■□□□□ 0.22
ZEB2-212ENST00000453352 ABCC8Q09428 1581 aa16.45■□□□□ 0.22
ZEB2-212ENST00000453352 TARBP1Q13395 1621 aaKnown RBP16.43■□□□□ 0.22
ZEB2-212ENST00000453352 DNMBPQ6XZF7 1577 aa16.43■□□□□ 0.22
ZEB2-212ENST00000453352 CYB5RLQ6IPT4 315 aa16.42■□□□□ 0.22
ZEB2-212ENST00000453352 CCDC88BA6NC98 1476 aa16.41■□□□□ 0.22
ZEB2-212ENST00000453352 AQRO60306 1485 aaKnown RBP eCLIP16.35■□□□□ 0.21
ZEB2-212ENST00000453352 TRHP20396 242 aaPredicted RBP16.32■□□□□ 0.2
ZEB2-212ENST00000453352 POLA1P09884 1462 aaPredicted RBP16.3■□□□□ 0.2
ZEB2-212ENST00000453352 CLASP1Q7Z460 1538 aa16.29■□□□□ 0.2
ZEB2-212ENST00000453352 WDR97A6NE52 1622 aa16.28■□□□□ 0.2
ZEB2-212ENST00000453352 RAD54L2Q9Y4B4 1467 aa16.21■□□□□ 0.19
ZEB2-212ENST00000453352 SYNJ1O43426 1573 aa16.21■□□□□ 0.18
ZEB2-212ENST00000453352 FBLN2P98095 1184 aa16.2■□□□□ 0.18
ZEB2-212ENST00000453352 SNAPC4Q5SXM2 1469 aa16.2■□□□□ 0.18
ZEB2-212ENST00000453352 MAGI1Q96QZ7 1491 aaPredicted RBP16.18■□□□□ 0.18
ZEB2-212ENST00000453352 SOGA1O94964 1423 aa16.17■□□□□ 0.18
ZEB2-212ENST00000453352 TDRD9Q8NDG6 1382 aaKnown RBP16.16■□□□□ 0.18
ZEB2-212ENST00000453352 AEBP2Q6ZN18 517 aaPredicted RBP16.13■□□□□ 0.17
ZEB2-212ENST00000453352 FGD5Q6ZNL6 1462 aa16.13■□□□□ 0.17
ZEB2-212ENST00000453352 SYNJ2O15056 1496 aa16.12■□□□□ 0.17
ZEB2-212ENST00000453352 GRIN2BQ13224 1484 aa16.11■□□□□ 0.17
ZEB2-212ENST00000453352 PBRM1Q86U86 1689 aa16.08■□□□□ 0.17
ZEB2-212ENST00000453352 CHMP7Q8WUX9 453 aaPredicted RBP16.08■□□□□ 0.16
ZEB2-212ENST00000453352 GAPVD1Q14C86 1478 aa16.08■□□□□ 0.16
ZEB2-212ENST00000453352 CUX1P39880 1505 aa16.06■□□□□ 0.16
ZEB2-212ENST00000453352 ABCA5Q8WWZ7 1642 aa16.01■□□□□ 0.15
ZEB2-212ENST00000453352 ABCA10Q8WWZ4 1543 aa15.96■□□□□ 0.15
ZEB2-212ENST00000453352 ERCC6L2Q5T890 1561 aa15.96■□□□□ 0.14
ZEB2-212ENST00000453352 SHROOM2Q13796 1616 aa15.94■□□□□ 0.14
ZEB2-212ENST00000453352 KIF13AQ9H1H9 1805 aa15.93■□□□□ 0.14
ZEB2-212ENST00000453352 GRIN2AQ12879 1464 aa15.92■□□□□ 0.14
ZEB2-212ENST00000453352 CEP170Q5SW79 1584 aa15.92■□□□□ 0.14
ZEB2-212ENST00000453352 NUP160Q12769 1436 aa15.91■□□□□ 0.14
ZEB2-212ENST00000453352 ADAMTS12P58397 1594 aa15.89■□□□□ 0.13
ZEB2-212ENST00000453352 FHAD1B1AJZ9 1412 aa15.78■□□□□ 0.12
ZEB2-212ENST00000453352 BIVM-ERCC5R4GMW8 1640 aa15.77■□□□□ 0.12
ZEB2-212ENST00000453352 ERICH3Q5RHP9 1530 aa15.76■□□□□ 0.11
ZEB2-212ENST00000453352 WRNQ14191 1432 aaPredicted RBP eCLIP15.76■□□□□ 0.11
ZEB2-212ENST00000453352 MAPKBP1O60336 1514 aa15.74■□□□□ 0.11
ZEB2-212ENST00000453352 ABCC10Q5T3U5 1492 aa15.74■□□□□ 0.11
ZEB2-212ENST00000453352 TOP2BQ02880 1626 aa15.74■□□□□ 0.11
ZEB2-212ENST00000453352 DIP2BQ9P265 1576 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms