Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AL133373.2-201ENST00000623187 2828 ntBASIC14.98□□□□□ -0.01
GCM1Q9NP62 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.98□□□□□ -0.01
GCM1Q9NP62 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.98□□□□□ -0.01
GCM1Q9NP62 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GCM1Q9NP62 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GCM1Q9NP62 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.98□□□□□ -0.01
GCM1Q9NP62 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GCM1Q9NP62 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.98□□□□□ -0.01
GCM1Q9NP62 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
GCM1Q9NP62 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.98□□□□□ -0.01
GCM1Q9NP62 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.98□□□□□ -0.01
GCM1Q9NP62 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GCM1Q9NP62 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GCM1Q9NP62 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GCM1Q9NP62 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.98□□□□□ -0.01
GCM1Q9NP62 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.98□□□□□ -0.01
GCM1Q9NP62 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.98□□□□□ -0.01
GCM1Q9NP62 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GCM1Q9NP62 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
GCM1Q9NP62 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
GCM1Q9NP62 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.97□□□□□ -0.01
GCM1Q9NP62 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GCM1Q9NP62 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
GCM1Q9NP62 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GCM1Q9NP62 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GCM1Q9NP62 BX276092.7-203ENST00000637198 1536 ntBASIC14.97□□□□□ -0.01
GCM1Q9NP62 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GCM1Q9NP62 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GCM1Q9NP62 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GCM1Q9NP62 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GCM1Q9NP62 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
GCM1Q9NP62 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GCM1Q9NP62 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GCM1Q9NP62 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
GCM1Q9NP62 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GCM1Q9NP62 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.97□□□□□ -0.01
GCM1Q9NP62 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
GCM1Q9NP62 AL450487.1-201ENST00000426799 995 ntBASIC14.97□□□□□ -0.01
GCM1Q9NP62 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GCM1Q9NP62 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.97□□□□□ -0.01
GCM1Q9NP62 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.97□□□□□ -0.01
GCM1Q9NP62 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.97□□□□□ -0.01
GCM1Q9NP62 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.97□□□□□ -0.01
GCM1Q9NP62 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.97□□□□□ -0.01
GCM1Q9NP62 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.97□□□□□ -0.01
GCM1Q9NP62 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.97□□□□□ -0.01
GCM1Q9NP62 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
GCM1Q9NP62 LINC01711-201ENST00000598340 967 ntBASIC14.97□□□□□ -0.01
GCM1Q9NP62 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.97□□□□□ -0.01
GCM1Q9NP62 AL591684.3-201ENST00000605187 298 ntBASIC14.97□□□□□ -0.01
GCM1Q9NP62 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GCM1Q9NP62 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GCM1Q9NP62 AC008764.6-201ENST00000595909 2069 ntBASIC14.97□□□□□ -0.01
GCM1Q9NP62 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GCM1Q9NP62 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.97□□□□□ -0.01
GCM1Q9NP62 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.97□□□□□ -0.01
GCM1Q9NP62 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
GCM1Q9NP62 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GCM1Q9NP62 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GCM1Q9NP62 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GCM1Q9NP62 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.97□□□□□ -0.01
GCM1Q9NP62 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GCM1Q9NP62 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
GCM1Q9NP62 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.96□□□□□ -0.01
GCM1Q9NP62 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GCM1Q9NP62 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.96□□□□□ -0.01
GCM1Q9NP62 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.96□□□□□ -0.01
GCM1Q9NP62 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.96□□□□□ -0.01
GCM1Q9NP62 AC012317.2-201ENST00000623305 2251 ntBASIC14.96□□□□□ -0.01
GCM1Q9NP62 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
GCM1Q9NP62 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.96□□□□□ -0.01
GCM1Q9NP62 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GCM1Q9NP62 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
GCM1Q9NP62 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GCM1Q9NP62 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GCM1Q9NP62 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
GCM1Q9NP62 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GCM1Q9NP62 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GCM1Q9NP62 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.96□□□□□ -0.01
GCM1Q9NP62 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GCM1Q9NP62 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GCM1Q9NP62 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GCM1Q9NP62 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GCM1Q9NP62 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.96□□□□□ -0.01
GCM1Q9NP62 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.96□□□□□ -0.01
GCM1Q9NP62 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.96□□□□□ -0.01
GCM1Q9NP62 AC122714.2-201ENST00000502787 707 ntBASIC14.96□□□□□ -0.01
GCM1Q9NP62 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GCM1Q9NP62 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.96□□□□□ -0.01
GCM1Q9NP62 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.96□□□□□ -0.01
GCM1Q9NP62 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GCM1Q9NP62 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.96□□□□□ -0.01
GCM1Q9NP62 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.96□□□□□ -0.01
GCM1Q9NP62 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.96□□□□□ -0.01
GCM1Q9NP62 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.96□□□□□ -0.01
GCM1Q9NP62 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
GCM1Q9NP62 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GCM1Q9NP62 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.96□□□□□ -0.01
GCM1Q9NP62 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.96□□□□□ -0.02
GCM1Q9NP62 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms