Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 SIGLEC16-201ENST00000599858 1437 ntBASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 ELK2BP-201ENST00000415014 1224 ntBASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 AC004706.3-202ENST00000621574 984 ntBASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.98■□□□□ 0.79
U2AF1L4Q8WU68 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 BCL2-203ENST00000589955 5011 ntBASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 AC006504.4-201ENST00000592118 1568 ntBASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 SPDYE21P-201ENST00000413323 827 ntBASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 AC190387.1-201ENST00000551683 408 ntBASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 PDPK2P-202ENST00000562415 1191 ntBASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
U2AF1L4Q8WU68 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 AL133373.2-201ENST00000623187 2828 ntBASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.96■□□□□ 0.79
U2AF1L4Q8WU68 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms