Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 MYCLP1-201ENST00000372451 1075 ntBASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 UNC93B7-201ENST00000509439 705 ntBASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 AP001269.4-201ENST00000609611 512 ntBASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 AL139327.4-201ENST00000612362 153 ntBASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 LYSMD4-203ENST00000378904 2122 ntBASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT1Q8NF37 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LPCAT1Q8NF37 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 AC132938.5-201ENST00000624980 1813 ntBASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 KLF4P1-201ENST00000412782 1185 ntBASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 STK25P1-201ENST00000585406 838 ntBASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 AP000867.4-201ENST00000641616 219 ntBASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT1Q8NF37 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT1Q8NF37 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT1Q8NF37 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT1Q8NF37 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms