Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SOX6P35712 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SOX6P35712 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SOX6P35712 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.74■□□□□ 0.11
SOX6P35712 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.74■□□□□ 0.11
SOX6P35712 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SOX6P35712 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SOX6P35712 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.73■□□□□ 0.11
SOX6P35712 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.73■□□□□ 0.11
SOX6P35712 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.73■□□□□ 0.11
SOX6P35712 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
SOX6P35712 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SOX6P35712 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.73■□□□□ 0.11
SOX6P35712 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SOX6P35712 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.73■□□□□ 0.11
SOX6P35712 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.73■□□□□ 0.11
SOX6P35712 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.73■□□□□ 0.11
SOX6P35712 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SOX6P35712 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 TSPY20P-201ENST00000450910 630 ntBASIC15.73■□□□□ 0.11
SOX6P35712 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.73■□□□□ 0.11
SOX6P35712 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.73■□□□□ 0.11
SOX6P35712 AC006058.3-201ENST00000606217 1069 ntBASIC15.73■□□□□ 0.11
SOX6P35712 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SOX6P35712 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
SOX6P35712 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.73■□□□□ 0.11
SOX6P35712 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 GPAT2P1-201ENST00000444924 1672 ntBASIC15.73■□□□□ 0.11
SOX6P35712 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SOX6P35712 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX6P35712 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.72■□□□□ 0.11
SOX6P35712 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.72■□□□□ 0.11
SOX6P35712 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SOX6P35712 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.72■□□□□ 0.11
SOX6P35712 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
SOX6P35712 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SOX6P35712 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SOX6P35712 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SOX6P35712 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.72■□□□□ 0.11
SOX6P35712 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.72■□□□□ 0.11
SOX6P35712 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
SOX6P35712 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.72■□□□□ 0.11
SOX6P35712 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.72■□□□□ 0.11
SOX6P35712 AC116407.2-201ENST00000613639 860 ntBASIC15.72■□□□□ 0.11
SOX6P35712 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.72■□□□□ 0.11
SOX6P35712 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX6P35712 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SOX6P35712 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.71■□□□□ 0.11
SOX6P35712 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SOX6P35712 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.71■□□□□ 0.11
SOX6P35712 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SOX6P35712 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SOX6P35712 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SOX6P35712 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SOX6P35712 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SOX6P35712 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SOX6P35712 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SOX6P35712 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms