Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.79■□□□□ 0.44
RIPK2O43353 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.79■□□□□ 0.44
RIPK2O43353 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RIPK2O43353 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RIPK2O43353 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RIPK2O43353 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RIPK2O43353 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RIPK2O43353 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.79■□□□□ 0.44
RIPK2O43353 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RIPK2O43353 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RIPK2O43353 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RIPK2O43353 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RIPK2O43353 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.79■□□□□ 0.44
RIPK2O43353 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.78■□□□□ 0.44
RIPK2O43353 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RIPK2O43353 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.78■□□□□ 0.44
RIPK2O43353 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RIPK2O43353 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.78■□□□□ 0.44
RIPK2O43353 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.78■□□□□ 0.44
RIPK2O43353 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.78■□□□□ 0.44
RIPK2O43353 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
RIPK2O43353 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.78■□□□□ 0.44
RIPK2O43353 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.78■□□□□ 0.44
RIPK2O43353 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.78■□□□□ 0.44
RIPK2O43353 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RIPK2O43353 PCDHA1-201ENST00000378133 2726 ntBASIC17.78■□□□□ 0.44
RIPK2O43353 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RIPK2O43353 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RIPK2O43353 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
RIPK2O43353 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RIPK2O43353 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RIPK2O43353 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RIPK2O43353 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RIPK2O43353 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RIPK2O43353 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.77■□□□□ 0.44
RIPK2O43353 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RIPK2O43353 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RIPK2O43353 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RIPK2O43353 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.77■□□□□ 0.44
RIPK2O43353 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.77■□□□□ 0.44
RIPK2O43353 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RIPK2O43353 AL391005.1-201ENST00000623953 2435 ntBASIC17.77■□□□□ 0.44
RIPK2O43353 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
RIPK2O43353 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RIPK2O43353 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RIPK2O43353 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RIPK2O43353 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RIPK2O43353 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.77■□□□□ 0.44
RIPK2O43353 AC128688.1-201ENST00000487626 519 ntBASIC17.77■□□□□ 0.44
RIPK2O43353 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RIPK2O43353 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.77■□□□□ 0.44
RIPK2O43353 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.77■□□□□ 0.44
RIPK2O43353 AL512604.3-201ENST00000569583 964 ntBASIC17.77■□□□□ 0.44
RIPK2O43353 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.77■□□□□ 0.44
RIPK2O43353 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.77■□□□□ 0.44
RIPK2O43353 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.77■□□□□ 0.44
RIPK2O43353 AC004263.2-201ENST00000617183 678 ntBASIC17.77■□□□□ 0.44
RIPK2O43353 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.77■□□□□ 0.44
RIPK2O43353 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RIPK2O43353 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.77■□□□□ 0.44
RIPK2O43353 PCDHB17P-201ENST00000539533 2393 ntBASIC17.77■□□□□ 0.44
RIPK2O43353 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RIPK2O43353 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.77■□□□□ 0.44
RIPK2O43353 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RIPK2O43353 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RIPK2O43353 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RIPK2O43353 AC092068.3-201ENST00000587894 2016 ntBASIC17.77■□□□□ 0.43
RIPK2O43353 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RIPK2O43353 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.77■□□□□ 0.43
RIPK2O43353 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RIPK2O43353 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
RIPK2O43353 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.77■□□□□ 0.43
RIPK2O43353 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RIPK2O43353 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RIPK2O43353 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RIPK2O43353 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RIPK2O43353 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.76■□□□□ 0.43
RIPK2O43353 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
RIPK2O43353 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms