Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PCDHA2Q9Y5H9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC27.46■■□□□ 1.99
PCDHA2Q9Y5H9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
PCDHA2Q9Y5H9 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC27.45■■□□□ 1.98
PCDHA2Q9Y5H9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.45■■□□□ 1.98
PCDHA2Q9Y5H9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.45■■□□□ 1.98
PCDHA2Q9Y5H9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHA2Q9Y5H9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHA2Q9Y5H9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHA2Q9Y5H9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC27.44■■□□□ 1.98
PCDHA2Q9Y5H9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHA2Q9Y5H9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHA2Q9Y5H9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHA2Q9Y5H9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHA2Q9Y5H9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHA2Q9Y5H9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.43■■□□□ 1.98
PCDHA2Q9Y5H9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.43■■□□□ 1.98
PCDHA2Q9Y5H9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHA2Q9Y5H9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
PCDHA2Q9Y5H9 HES4-204ENST00000484667 667 ntTSL 3 BASIC27.43■■□□□ 1.98
PCDHA2Q9Y5H9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.43■■□□□ 1.98
PCDHA2Q9Y5H9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHA2Q9Y5H9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHA2Q9Y5H9 AC093536.1-201ENST00000569153 554 ntBASIC27.42■■□□□ 1.98
PCDHA2Q9Y5H9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHA2Q9Y5H9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC27.42■■□□□ 1.98
PCDHA2Q9Y5H9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHA2Q9Y5H9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHA2Q9Y5H9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHA2Q9Y5H9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHA2Q9Y5H9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHA2Q9Y5H9 MIR3960-201ENST00000583311 91 ntBASIC27.41■■□□□ 1.98
PCDHA2Q9Y5H9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
PCDHA2Q9Y5H9 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PCDHA2Q9Y5H9 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
PCDHA2Q9Y5H9 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC27.39■■□□□ 1.98
PCDHA2Q9Y5H9 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.39■■□□□ 1.98
PCDHA2Q9Y5H9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
PCDHA2Q9Y5H9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
PCDHA2Q9Y5H9 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC27.39■■□□□ 1.98
PCDHA2Q9Y5H9 RAP2CP1-202ENST00000605179 643 ntBASIC27.39■■□□□ 1.98
PCDHA2Q9Y5H9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.97
PCDHA2Q9Y5H9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
PCDHA2Q9Y5H9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PCDHA2Q9Y5H9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PCDHA2Q9Y5H9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHA2Q9Y5H9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHA2Q9Y5H9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHA2Q9Y5H9 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
PCDHA2Q9Y5H9 AP004609.3-201ENST00000610705 1884 ntBASIC27.36■■□□□ 1.97
PCDHA2Q9Y5H9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHA2Q9Y5H9 AL359504.2-201ENST00000605506 1601 ntBASIC27.35■■□□□ 1.97
PCDHA2Q9Y5H9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHA2Q9Y5H9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHA2Q9Y5H9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHA2Q9Y5H9 DUX4L18-201ENST00000553347 1267 ntBASIC27.35■■□□□ 1.97
PCDHA2Q9Y5H9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHA2Q9Y5H9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
PCDHA2Q9Y5H9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHA2Q9Y5H9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHA2Q9Y5H9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHA2Q9Y5H9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC27.34■■□□□ 1.97
PCDHA2Q9Y5H9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHA2Q9Y5H9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC27.34■■□□□ 1.97
PCDHA2Q9Y5H9 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHA2Q9Y5H9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.33■■□□□ 1.97
PCDHA2Q9Y5H9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHA2Q9Y5H9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHA2Q9Y5H9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC27.33■■□□□ 1.97
PCDHA2Q9Y5H9 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC27.33■■□□□ 1.97
PCDHA2Q9Y5H9 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC27.33■■□□□ 1.97
PCDHA2Q9Y5H9 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC27.33■■□□□ 1.97
PCDHA2Q9Y5H9 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHA2Q9Y5H9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
PCDHA2Q9Y5H9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC27.32■■□□□ 1.96
PCDHA2Q9Y5H9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHA2Q9Y5H9 AC142472.1-201ENST00000612013 1741 ntBASIC27.32■■□□□ 1.96
PCDHA2Q9Y5H9 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHA2Q9Y5H9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
PCDHA2Q9Y5H9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.31■■□□□ 1.96
PCDHA2Q9Y5H9 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC27.31■■□□□ 1.96
PCDHA2Q9Y5H9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHA2Q9Y5H9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC27.3■■□□□ 1.96
PCDHA2Q9Y5H9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA2Q9Y5H9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA2Q9Y5H9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC27.3■■□□□ 1.96
PCDHA2Q9Y5H9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC27.3■■□□□ 1.96
PCDHA2Q9Y5H9 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC27.3■■□□□ 1.96
PCDHA2Q9Y5H9 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC27.3■■□□□ 1.96
PCDHA2Q9Y5H9 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA2Q9Y5H9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA2Q9Y5H9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC27.3■■□□□ 1.96
PCDHA2Q9Y5H9 DUX4L9-201ENST00000449051 1259 ntBASIC27.29■■□□□ 1.96
PCDHA2Q9Y5H9 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC27.29■■□□□ 1.96
PCDHA2Q9Y5H9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHA2Q9Y5H9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHA2Q9Y5H9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHA2Q9Y5H9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHA2Q9Y5H9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC27.28■■□□□ 1.96
PCDHA2Q9Y5H9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms