Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC33.72■■■□□ 2.99
NINLQ9Y2I6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC33.72■■■□□ 2.99
NINLQ9Y2I6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
NINLQ9Y2I6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
NINLQ9Y2I6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC33.71■■■□□ 2.99
NINLQ9Y2I6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC33.71■■■□□ 2.99
NINLQ9Y2I6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
NINLQ9Y2I6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC33.71■■■□□ 2.99
NINLQ9Y2I6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC33.71■■■□□ 2.99
NINLQ9Y2I6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC33.71■■■□□ 2.99
NINLQ9Y2I6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
NINLQ9Y2I6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC33.7■■■□□ 2.99
NINLQ9Y2I6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC33.7■■■□□ 2.99
NINLQ9Y2I6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC33.7■■■□□ 2.98
NINLQ9Y2I6 AC142472.1-201ENST00000612013 1741 ntBASIC33.69■■■□□ 2.98
NINLQ9Y2I6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC33.69■■■□□ 2.98
NINLQ9Y2I6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
NINLQ9Y2I6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC33.68■■■□□ 2.98
NINLQ9Y2I6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC33.68■■■□□ 2.98
NINLQ9Y2I6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC33.68■■■□□ 2.98
NINLQ9Y2I6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
NINLQ9Y2I6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC33.67■■■□□ 2.98
NINLQ9Y2I6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC33.67■■■□□ 2.98
NINLQ9Y2I6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC33.67■■■□□ 2.98
NINLQ9Y2I6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC33.67■■■□□ 2.98
NINLQ9Y2I6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC33.67■■■□□ 2.98
NINLQ9Y2I6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC33.67■■■□□ 2.98
NINLQ9Y2I6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC33.67■■■□□ 2.98
NINLQ9Y2I6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
NINLQ9Y2I6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC33.67■■■□□ 2.98
NINLQ9Y2I6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC33.66■■■□□ 2.98
NINLQ9Y2I6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC33.65■■■□□ 2.98
NINLQ9Y2I6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC33.65■■■□□ 2.98
NINLQ9Y2I6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
NINLQ9Y2I6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC33.65■■■□□ 2.98
NINLQ9Y2I6 AC018755.3-202ENST00000596210 929 ntBASIC33.64■■■□□ 2.98
NINLQ9Y2I6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC33.64■■■□□ 2.98
NINLQ9Y2I6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
NINLQ9Y2I6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
NINLQ9Y2I6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
NINLQ9Y2I6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
NINLQ9Y2I6 AC074183.2-201ENST00000623112 922 ntBASIC33.62■■■□□ 2.97
NINLQ9Y2I6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC33.62■■■□□ 2.97
NINLQ9Y2I6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
NINLQ9Y2I6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
NINLQ9Y2I6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC33.61■■■□□ 2.97
NINLQ9Y2I6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
NINLQ9Y2I6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
NINLQ9Y2I6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC33.6■■■□□ 2.97
NINLQ9Y2I6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC33.6■■■□□ 2.97
NINLQ9Y2I6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC33.59■■■□□ 2.97
NINLQ9Y2I6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
NINLQ9Y2I6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
NINLQ9Y2I6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
NINLQ9Y2I6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC33.58■■■□□ 2.97
NINLQ9Y2I6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
NINLQ9Y2I6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
NINLQ9Y2I6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC33.57■■■□□ 2.96
NINLQ9Y2I6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
NINLQ9Y2I6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC33.57■■■□□ 2.96
NINLQ9Y2I6 HYI-210ENST00000486909 905 ntTSL 5 BASIC33.57■■■□□ 2.96
NINLQ9Y2I6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
NINLQ9Y2I6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC33.56■■■□□ 2.96
NINLQ9Y2I6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC33.55■■■□□ 2.96
NINLQ9Y2I6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC33.55■■■□□ 2.96
NINLQ9Y2I6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC33.55■■■□□ 2.96
NINLQ9Y2I6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC33.55■■■□□ 2.96
NINLQ9Y2I6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
NINLQ9Y2I6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
NINLQ9Y2I6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
NINLQ9Y2I6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC33.54■■■□□ 2.96
NINLQ9Y2I6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC33.54■■■□□ 2.96
NINLQ9Y2I6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC33.54■■■□□ 2.96
NINLQ9Y2I6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
NINLQ9Y2I6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
NINLQ9Y2I6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
NINLQ9Y2I6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
NINLQ9Y2I6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
NINLQ9Y2I6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
NINLQ9Y2I6 AC139795.1-202ENST00000500444 432 ntBASIC33.52■■■□□ 2.96
NINLQ9Y2I6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC33.52■■■□□ 2.96
NINLQ9Y2I6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC33.51■■■□□ 2.95
NINLQ9Y2I6 AL035685.1-201ENST00000636663 812 ntBASIC33.5■■■□□ 2.95
NINLQ9Y2I6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
NINLQ9Y2I6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC33.5■■■□□ 2.95
NINLQ9Y2I6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC33.49■■■□□ 2.95
NINLQ9Y2I6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
NINLQ9Y2I6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC33.48■■■□□ 2.95
NINLQ9Y2I6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC33.48■■■□□ 2.95
NINLQ9Y2I6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
NINLQ9Y2I6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC33.47■■■□□ 2.95
NINLQ9Y2I6 AC087393.1-201ENST00000582896 145 ntBASIC33.47■■■□□ 2.95
NINLQ9Y2I6 AC010980.1-201ENST00000587192 1142 ntBASIC33.47■■■□□ 2.95
NINLQ9Y2I6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
NINLQ9Y2I6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC33.47■■■□□ 2.95
NINLQ9Y2I6 AP004609.3-201ENST00000610705 1884 ntBASIC33.47■■■□□ 2.95
NINLQ9Y2I6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC33.47■■■□□ 2.95
NINLQ9Y2I6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
NINLQ9Y2I6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
NINLQ9Y2I6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC33.47■■■□□ 2.95
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms