Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC38.25■■■■□ 3.71
CDK11AQ9UQ88 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC38.25■■■■□ 3.71
CDK11AQ9UQ88 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC38.25■■■■□ 3.71
CDK11AQ9UQ88 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
CDK11AQ9UQ88 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC38.24■■■■□ 3.71
CDK11AQ9UQ88 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC38.24■■■■□ 3.71
CDK11AQ9UQ88 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC38.23■■■■□ 3.71
CDK11AQ9UQ88 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC38.23■■■■□ 3.71
CDK11AQ9UQ88 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
CDK11AQ9UQ88 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC38.21■■■■□ 3.71
CDK11AQ9UQ88 AC131212.1-201ENST00000613771 668 ntBASIC38.2■■■■□ 3.71
CDK11AQ9UQ88 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
CDK11AQ9UQ88 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
CDK11AQ9UQ88 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC38.19■■■■□ 3.7
CDK11AQ9UQ88 ABCB10P1-201ENST00000614297 2181 ntBASIC38.19■■■■□ 3.7
CDK11AQ9UQ88 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC38.18■■■■□ 3.7
CDK11AQ9UQ88 THA1P-201ENST00000590384 1145 ntBASIC38.18■■■■□ 3.7
CDK11AQ9UQ88 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC38.18■■■■□ 3.7
CDK11AQ9UQ88 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC38.18■■■■□ 3.7
CDK11AQ9UQ88 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
CDK11AQ9UQ88 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
CDK11AQ9UQ88 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC38.17■■■■□ 3.7
CDK11AQ9UQ88 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC38.17■■■■□ 3.7
CDK11AQ9UQ88 RPS2P7-201ENST00000447334 885 ntBASIC38.17■■■■□ 3.7
CDK11AQ9UQ88 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
CDK11AQ9UQ88 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
CDK11AQ9UQ88 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
CDK11AQ9UQ88 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
CDK11AQ9UQ88 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC38.15■■■■□ 3.7
CDK11AQ9UQ88 LONRF2P2-201ENST00000439212 571 ntBASIC38.15■■■■□ 3.7
CDK11AQ9UQ88 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
CDK11AQ9UQ88 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC38.13■■■■□ 3.69
CDK11AQ9UQ88 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC38.13■■■■□ 3.69
CDK11AQ9UQ88 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC38.13■■■■□ 3.69
CDK11AQ9UQ88 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC38.12■■■■□ 3.69
CDK11AQ9UQ88 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC38.12■■■■□ 3.69
CDK11AQ9UQ88 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC38.12■■■■□ 3.69
CDK11AQ9UQ88 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
CDK11AQ9UQ88 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC38.11■■■■□ 3.69
CDK11AQ9UQ88 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
CDK11AQ9UQ88 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
CDK11AQ9UQ88 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
CDK11AQ9UQ88 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC38.1■■■■□ 3.69
CDK11AQ9UQ88 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
CDK11AQ9UQ88 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC38.1■■■■□ 3.69
CDK11AQ9UQ88 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
CDK11AQ9UQ88 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC38.09■■■■□ 3.69
CDK11AQ9UQ88 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC38.09■■■■□ 3.69
CDK11AQ9UQ88 RNF146-205ENST00000477776 762 ntTSL 3 BASIC38.09■■■■□ 3.69
CDK11AQ9UQ88 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
CDK11AQ9UQ88 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC38.09■■■■□ 3.69
CDK11AQ9UQ88 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC38.08■■■■□ 3.69
CDK11AQ9UQ88 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC38.08■■■■□ 3.69
CDK11AQ9UQ88 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC38.08■■■■□ 3.69
CDK11AQ9UQ88 TK2-216ENST00000564917 1156 ntTSL 3 BASIC38.08■■■■□ 3.69
CDK11AQ9UQ88 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC38.08■■■■□ 3.69
CDK11AQ9UQ88 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC38.07■■■■□ 3.68
CDK11AQ9UQ88 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC38.07■■■■□ 3.68
CDK11AQ9UQ88 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC38.07■■■■□ 3.68
CDK11AQ9UQ88 AL356441.2-201ENST00000443009 864 ntBASIC38.07■■■■□ 3.68
CDK11AQ9UQ88 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.68
CDK11AQ9UQ88 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC38.07■■■■□ 3.68
CDK11AQ9UQ88 Z92544.1-202ENST00000571933 1220 ntBASIC38.06■■■■□ 3.68
CDK11AQ9UQ88 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
CDK11AQ9UQ88 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC38.06■■■■□ 3.68
CDK11AQ9UQ88 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
CDK11AQ9UQ88 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC38.05■■■■□ 3.68
CDK11AQ9UQ88 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC38.05■■■■□ 3.68
CDK11AQ9UQ88 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC38.05■■■■□ 3.68
CDK11AQ9UQ88 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC38.04■■■■□ 3.68
CDK11AQ9UQ88 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
CDK11AQ9UQ88 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC38.03■■■■□ 3.68
CDK11AQ9UQ88 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
CDK11AQ9UQ88 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
CDK11AQ9UQ88 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC38.03■■■■□ 3.68
CDK11AQ9UQ88 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
CDK11AQ9UQ88 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC38.03■■■■□ 3.68
CDK11AQ9UQ88 KRT18P10-201ENST00000388836 1287 ntBASIC38.02■■■■□ 3.68
CDK11AQ9UQ88 AC239859.2-201ENST00000444165 318 ntBASIC38.02■■■■□ 3.68
CDK11AQ9UQ88 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC38.02■■■■□ 3.68
CDK11AQ9UQ88 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC38.02■■■■□ 3.68
CDK11AQ9UQ88 MTURN-203ENST00000409688 843 ntTSL 2 BASIC38.01■■■■□ 3.68
CDK11AQ9UQ88 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC38.01■■■■□ 3.68
CDK11AQ9UQ88 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC38.01■■■■□ 3.67
CDK11AQ9UQ88 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC38.01■■■■□ 3.67
CDK11AQ9UQ88 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
CDK11AQ9UQ88 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC38■■■■□ 3.67
CDK11AQ9UQ88 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC38■■■■□ 3.67
CDK11AQ9UQ88 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC37.98■■■■□ 3.67
CDK11AQ9UQ88 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
CDK11AQ9UQ88 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC37.98■■■■□ 3.67
CDK11AQ9UQ88 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC37.98■■■■□ 3.67
CDK11AQ9UQ88 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC37.97■■■■□ 3.67
CDK11AQ9UQ88 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC37.97■■■■□ 3.67
CDK11AQ9UQ88 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC37.97■■■■□ 3.67
CDK11AQ9UQ88 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC37.97■■■■□ 3.67
CDK11AQ9UQ88 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC37.96■■■■□ 3.67
CDK11AQ9UQ88 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC37.95■■■■□ 3.67
CDK11AQ9UQ88 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC37.95■■■■□ 3.67
CDK11AQ9UQ88 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC37.95■■■■□ 3.67
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms