Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TREM2Q9NZC2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.9■□□□□ 0.94
TREM2Q9NZC2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
TREM2Q9NZC2 ECEL1P2-201ENST00000461596 1295 ntBASIC20.9■□□□□ 0.94
TREM2Q9NZC2 AL449106.1-201ENST00000608517 1980 ntBASIC20.9■□□□□ 0.94
TREM2Q9NZC2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TREM2Q9NZC2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TREM2Q9NZC2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TREM2Q9NZC2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
TREM2Q9NZC2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.89■□□□□ 0.93
TREM2Q9NZC2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TREM2Q9NZC2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TREM2Q9NZC2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
TREM2Q9NZC2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
TREM2Q9NZC2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TREM2Q9NZC2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TREM2Q9NZC2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.88■□□□□ 0.93
TREM2Q9NZC2 U85056.1-201ENST00000616429 682 ntBASIC20.88■□□□□ 0.93
TREM2Q9NZC2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.88■□□□□ 0.93
TREM2Q9NZC2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.87■□□□□ 0.93
TREM2Q9NZC2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.87■□□□□ 0.93
TREM2Q9NZC2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.87■□□□□ 0.93
TREM2Q9NZC2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TREM2Q9NZC2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.87■□□□□ 0.93
TREM2Q9NZC2 SMPD5-203ENST00000639008 1464 ntBASIC20.87■□□□□ 0.93
TREM2Q9NZC2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TREM2Q9NZC2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TREM2Q9NZC2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TREM2Q9NZC2 AC012354.3-201ENST00000623734 483 ntBASIC20.86■□□□□ 0.93
TREM2Q9NZC2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TREM2Q9NZC2 AL359504.2-201ENST00000605506 1601 ntBASIC20.86■□□□□ 0.93
TREM2Q9NZC2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.85■□□□□ 0.93
TREM2Q9NZC2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.85■□□□□ 0.93
TREM2Q9NZC2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TREM2Q9NZC2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
TREM2Q9NZC2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TREM2Q9NZC2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TREM2Q9NZC2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TREM2Q9NZC2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TREM2Q9NZC2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.83■□□□□ 0.93
TREM2Q9NZC2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.83■□□□□ 0.93
TREM2Q9NZC2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TREM2Q9NZC2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.83■□□□□ 0.93
TREM2Q9NZC2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TREM2Q9NZC2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TREM2Q9NZC2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TREM2Q9NZC2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.82■□□□□ 0.92
TREM2Q9NZC2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TREM2Q9NZC2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TREM2Q9NZC2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TREM2Q9NZC2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TREM2Q9NZC2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TREM2Q9NZC2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.81■□□□□ 0.92
TREM2Q9NZC2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TREM2Q9NZC2 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.8■□□□□ 0.92
TREM2Q9NZC2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.8■□□□□ 0.92
TREM2Q9NZC2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TREM2Q9NZC2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TREM2Q9NZC2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.8■□□□□ 0.92
TREM2Q9NZC2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.8■□□□□ 0.92
TREM2Q9NZC2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.8■□□□□ 0.92
TREM2Q9NZC2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.8■□□□□ 0.92
TREM2Q9NZC2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TREM2Q9NZC2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TREM2Q9NZC2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TREM2Q9NZC2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TREM2Q9NZC2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TREM2Q9NZC2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TREM2Q9NZC2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TREM2Q9NZC2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TREM2Q9NZC2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TREM2Q9NZC2 AL033527.3-201ENST00000566366 1196 ntBASIC20.78■□□□□ 0.92
TREM2Q9NZC2 AC007029.1-201ENST00000604183 313 ntBASIC20.78■□□□□ 0.92
TREM2Q9NZC2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TREM2Q9NZC2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TREM2Q9NZC2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TREM2Q9NZC2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TREM2Q9NZC2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TREM2Q9NZC2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TREM2Q9NZC2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TREM2Q9NZC2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.77■□□□□ 0.91
TREM2Q9NZC2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.76■□□□□ 0.91
TREM2Q9NZC2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.76■□□□□ 0.91
TREM2Q9NZC2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TREM2Q9NZC2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.76■□□□□ 0.91
TREM2Q9NZC2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.76■□□□□ 0.91
TREM2Q9NZC2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.76■□□□□ 0.91
TREM2Q9NZC2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TREM2Q9NZC2 AC025884.2-201ENST00000553429 711 ntBASIC20.76■□□□□ 0.91
TREM2Q9NZC2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.76■□□□□ 0.91
TREM2Q9NZC2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TREM2Q9NZC2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TREM2Q9NZC2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TREM2Q9NZC2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TREM2Q9NZC2 KRT18P60-201ENST00000312876 1297 ntBASIC20.75■□□□□ 0.91
TREM2Q9NZC2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TREM2Q9NZC2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TREM2Q9NZC2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TREM2Q9NZC2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TREM2Q9NZC2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms