Protein–RNA interactions for Protein: Q9C099

LRRCC1, Leucine-rich repeat and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRCC1Q9C099 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.17■■■□□ 2.42
LRRCC1Q9C099 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
LRRCC1Q9C099 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.16■■■□□ 2.42
LRRCC1Q9C099 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
LRRCC1Q9C099 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
LRRCC1Q9C099 AC091060.1-201ENST00000623524 1766 ntBASIC30.15■■■□□ 2.42
LRRCC1Q9C099 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
LRRCC1Q9C099 SMPD5-203ENST00000639008 1464 ntBASIC30.15■■■□□ 2.42
LRRCC1Q9C099 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.15■■■□□ 2.42
LRRCC1Q9C099 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
LRRCC1Q9C099 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
LRRCC1Q9C099 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC30.15■■■□□ 2.42
LRRCC1Q9C099 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.14■■■□□ 2.42
LRRCC1Q9C099 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.14■■■□□ 2.42
LRRCC1Q9C099 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
LRRCC1Q9C099 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
LRRCC1Q9C099 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
LRRCC1Q9C099 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
LRRCC1Q9C099 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
LRRCC1Q9C099 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
LRRCC1Q9C099 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
LRRCC1Q9C099 PFN2-211ENST00000489155 636 ntTSL 4 BASIC30.12■■■□□ 2.41
LRRCC1Q9C099 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
LRRCC1Q9C099 AC092803.2-201ENST00000564287 1899 ntBASIC30.12■■■□□ 2.41
LRRCC1Q9C099 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
LRRCC1Q9C099 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC30.11■■■□□ 2.41
LRRCC1Q9C099 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
LRRCC1Q9C099 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC30.11■■■□□ 2.41
LRRCC1Q9C099 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
LRRCC1Q9C099 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
LRRCC1Q9C099 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
LRRCC1Q9C099 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC30.1■■■□□ 2.41
LRRCC1Q9C099 REST-210ENST00000638187 1334 ntTSL 5 BASIC30.1■■■□□ 2.41
LRRCC1Q9C099 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC30.1■■■□□ 2.41
LRRCC1Q9C099 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
LRRCC1Q9C099 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC30.1■■■□□ 2.41
LRRCC1Q9C099 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
LRRCC1Q9C099 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC30.09■■■□□ 2.41
LRRCC1Q9C099 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.07■■■□□ 2.4
LRRCC1Q9C099 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
LRRCC1Q9C099 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC30.07■■■□□ 2.4
LRRCC1Q9C099 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
LRRCC1Q9C099 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.06■■■□□ 2.4
LRRCC1Q9C099 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
LRRCC1Q9C099 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC30.06■■■□□ 2.4
LRRCC1Q9C099 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
LRRCC1Q9C099 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC30.06■■■□□ 2.4
LRRCC1Q9C099 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC30.06■■■□□ 2.4
LRRCC1Q9C099 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
LRRCC1Q9C099 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
LRRCC1Q9C099 RNF126P1-201ENST00000567452 1320 ntBASIC30.05■■■□□ 2.4
LRRCC1Q9C099 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
LRRCC1Q9C099 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
LRRCC1Q9C099 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC30.05■■■□□ 2.4
LRRCC1Q9C099 MIR3960-201ENST00000583311 91 ntBASIC30.05■■■□□ 2.4
LRRCC1Q9C099 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC30.05■■■□□ 2.4
LRRCC1Q9C099 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.05■■■□□ 2.4
LRRCC1Q9C099 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
LRRCC1Q9C099 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC30.04■■■□□ 2.4
LRRCC1Q9C099 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
LRRCC1Q9C099 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
LRRCC1Q9C099 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC30.04■■■□□ 2.4
LRRCC1Q9C099 HSD17B1P1-201ENST00000590052 955 ntBASIC30.04■■■□□ 2.4
LRRCC1Q9C099 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
LRRCC1Q9C099 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
LRRCC1Q9C099 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC30.03■■■□□ 2.4
LRRCC1Q9C099 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
LRRCC1Q9C099 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC30.03■■■□□ 2.4
LRRCC1Q9C099 AC145676.1-201ENST00000514988 2004 ntBASIC30.03■■■□□ 2.4
LRRCC1Q9C099 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
LRRCC1Q9C099 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
LRRCC1Q9C099 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
LRRCC1Q9C099 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
LRRCC1Q9C099 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
LRRCC1Q9C099 AC007029.1-201ENST00000604183 313 ntBASIC30.01■■■□□ 2.39
LRRCC1Q9C099 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC30■■■□□ 2.39
LRRCC1Q9C099 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
LRRCC1Q9C099 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
LRRCC1Q9C099 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC30■■■□□ 2.39
LRRCC1Q9C099 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
LRRCC1Q9C099 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30■■■□□ 2.39
LRRCC1Q9C099 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
LRRCC1Q9C099 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.99■■■□□ 2.39
LRRCC1Q9C099 DUSP8P4-201ENST00000399538 1761 ntBASIC29.99■■■□□ 2.39
LRRCC1Q9C099 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
LRRCC1Q9C099 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
LRRCC1Q9C099 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
LRRCC1Q9C099 ERN1-208ENST00000606895 2068 ntBASIC29.99■■■□□ 2.39
LRRCC1Q9C099 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
LRRCC1Q9C099 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC29.98■■■□□ 2.39
LRRCC1Q9C099 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
LRRCC1Q9C099 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
LRRCC1Q9C099 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
LRRCC1Q9C099 RP9P-202ENST00000450133 1212 ntBASIC29.98■■■□□ 2.39
LRRCC1Q9C099 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
LRRCC1Q9C099 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC29.98■■■□□ 2.39
LRRCC1Q9C099 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
LRRCC1Q9C099 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
LRRCC1Q9C099 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
LRRCC1Q9C099 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms