Protein–RNA interactions for Protein: Q96NJ6

ZFP3, Zinc finger protein 3 homolog, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP3Q96NJ6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.16■■□□□ 1.14
ZFP3Q96NJ6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ZFP3Q96NJ6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.16■■□□□ 1.14
ZFP3Q96NJ6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.16■■□□□ 1.14
ZFP3Q96NJ6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
ZFP3Q96NJ6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZFP3Q96NJ6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
ZFP3Q96NJ6 AC018358.1-201ENST00000631079 1402 ntBASIC22.15■■□□□ 1.14
ZFP3Q96NJ6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
ZFP3Q96NJ6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
ZFP3Q96NJ6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.15■■□□□ 1.14
ZFP3Q96NJ6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
ZFP3Q96NJ6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
ZFP3Q96NJ6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.14■■□□□ 1.13
ZFP3Q96NJ6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.14■■□□□ 1.13
ZFP3Q96NJ6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.14■■□□□ 1.13
ZFP3Q96NJ6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
ZFP3Q96NJ6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
ZFP3Q96NJ6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ZFP3Q96NJ6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ZFP3Q96NJ6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.13■■□□□ 1.13
ZFP3Q96NJ6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ZFP3Q96NJ6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZFP3Q96NJ6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZFP3Q96NJ6 AC007029.1-201ENST00000604183 313 ntBASIC22.12■■□□□ 1.13
ZFP3Q96NJ6 U85056.1-201ENST00000616429 682 ntBASIC22.12■■□□□ 1.13
ZFP3Q96NJ6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZFP3Q96NJ6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZFP3Q96NJ6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
ZFP3Q96NJ6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZFP3Q96NJ6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ZFP3Q96NJ6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ZFP3Q96NJ6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZFP3Q96NJ6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
ZFP3Q96NJ6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.11■■□□□ 1.13
ZFP3Q96NJ6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZFP3Q96NJ6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZFP3Q96NJ6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZFP3Q96NJ6 SMPD5-203ENST00000639008 1464 ntBASIC22.1■■□□□ 1.13
ZFP3Q96NJ6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ZFP3Q96NJ6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ZFP3Q96NJ6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZFP3Q96NJ6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZFP3Q96NJ6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ZFP3Q96NJ6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.09■■□□□ 1.13
ZFP3Q96NJ6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.09■■□□□ 1.13
ZFP3Q96NJ6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ZFP3Q96NJ6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
ZFP3Q96NJ6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
ZFP3Q96NJ6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
ZFP3Q96NJ6 LINC01003-201ENST00000564834 1764 ntBASIC22.08■■□□□ 1.13
ZFP3Q96NJ6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ZFP3Q96NJ6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ZFP3Q96NJ6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
ZFP3Q96NJ6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.07■■□□□ 1.12
ZFP3Q96NJ6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ZFP3Q96NJ6 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.07■■□□□ 1.12
ZFP3Q96NJ6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ZFP3Q96NJ6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ZFP3Q96NJ6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
ZFP3Q96NJ6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.06■■□□□ 1.12
ZFP3Q96NJ6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ZFP3Q96NJ6 AC025884.2-201ENST00000553429 711 ntBASIC22.06■■□□□ 1.12
ZFP3Q96NJ6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.06■■□□□ 1.12
ZFP3Q96NJ6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ZFP3Q96NJ6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ZFP3Q96NJ6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.05■■□□□ 1.12
ZFP3Q96NJ6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
ZFP3Q96NJ6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.05■■□□□ 1.12
ZFP3Q96NJ6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ZFP3Q96NJ6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ZFP3Q96NJ6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ZFP3Q96NJ6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
ZFP3Q96NJ6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.04■■□□□ 1.12
ZFP3Q96NJ6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ZFP3Q96NJ6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZFP3Q96NJ6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZFP3Q96NJ6 KRT18P60-201ENST00000312876 1297 ntBASIC22.03■■□□□ 1.12
ZFP3Q96NJ6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.03■■□□□ 1.12
ZFP3Q96NJ6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
ZFP3Q96NJ6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZFP3Q96NJ6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZFP3Q96NJ6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.02■■□□□ 1.12
ZFP3Q96NJ6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.02■■□□□ 1.12
ZFP3Q96NJ6 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.02■■□□□ 1.12
ZFP3Q96NJ6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
ZFP3Q96NJ6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZFP3Q96NJ6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
ZFP3Q96NJ6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
ZFP3Q96NJ6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
ZFP3Q96NJ6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
ZFP3Q96NJ6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.01■■□□□ 1.11
ZFP3Q96NJ6 MIR3960-201ENST00000583311 91 ntBASIC22.01■■□□□ 1.11
ZFP3Q96NJ6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZFP3Q96NJ6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZFP3Q96NJ6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.01■■□□□ 1.11
ZFP3Q96NJ6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZFP3Q96NJ6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZFP3Q96NJ6 RP9P-202ENST00000450133 1212 ntBASIC22■■□□□ 1.11
ZFP3Q96NJ6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms