Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEH1LQ96EE3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEH1LQ96EE3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEH1LQ96EE3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEH1LQ96EE3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.09■□□□□ 0.97
SEH1LQ96EE3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SEH1LQ96EE3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEH1LQ96EE3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SEH1LQ96EE3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEH1LQ96EE3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SEH1LQ96EE3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.08■□□□□ 0.96
SEH1LQ96EE3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SEH1LQ96EE3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SEH1LQ96EE3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SEH1LQ96EE3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.07■□□□□ 0.96
SEH1LQ96EE3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SEH1LQ96EE3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.07■□□□□ 0.96
SEH1LQ96EE3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SEH1LQ96EE3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SEH1LQ96EE3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SEH1LQ96EE3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
SEH1LQ96EE3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEH1LQ96EE3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SEH1LQ96EE3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.06■□□□□ 0.96
SEH1LQ96EE3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.05■□□□□ 0.96
SEH1LQ96EE3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SEH1LQ96EE3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.05■□□□□ 0.96
SEH1LQ96EE3 AC008813.1-201ENST00000536597 885 ntBASIC21.05■□□□□ 0.96
SEH1LQ96EE3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEH1LQ96EE3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SEH1LQ96EE3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.04■□□□□ 0.96
SEH1LQ96EE3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEH1LQ96EE3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEH1LQ96EE3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SEH1LQ96EE3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
SEH1LQ96EE3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.04■□□□□ 0.96
SEH1LQ96EE3 MIR219A2-201ENST00000608502 1504 ntBASIC21.04■□□□□ 0.96
SEH1LQ96EE3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.03■□□□□ 0.96
SEH1LQ96EE3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.02■□□□□ 0.96
SEH1LQ96EE3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SEH1LQ96EE3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
SEH1LQ96EE3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SEH1LQ96EE3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.01■□□□□ 0.95
SEH1LQ96EE3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SEH1LQ96EE3 MIR639-201ENST00000384974 98 ntBASIC21.01■□□□□ 0.95
SEH1LQ96EE3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.01■□□□□ 0.95
SEH1LQ96EE3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SEH1LQ96EE3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SEH1LQ96EE3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SEH1LQ96EE3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
SEH1LQ96EE3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SEH1LQ96EE3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21■□□□□ 0.95
SEH1LQ96EE3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SEH1LQ96EE3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SEH1LQ96EE3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SEH1LQ96EE3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.98■□□□□ 0.95
SEH1LQ96EE3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SEH1LQ96EE3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SEH1LQ96EE3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SEH1LQ96EE3 AC148477.6-201ENST00000623746 465 ntBASIC20.98■□□□□ 0.95
SEH1LQ96EE3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SEH1LQ96EE3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SEH1LQ96EE3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SEH1LQ96EE3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SEH1LQ96EE3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SEH1LQ96EE3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SEH1LQ96EE3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SEH1LQ96EE3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SEH1LQ96EE3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.96■□□□□ 0.95
SEH1LQ96EE3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SEH1LQ96EE3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SEH1LQ96EE3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.96■□□□□ 0.95
SEH1LQ96EE3 ERN1-208ENST00000606895 2068 ntBASIC20.95■□□□□ 0.94
SEH1LQ96EE3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEH1LQ96EE3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SEH1LQ96EE3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
SEH1LQ96EE3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEH1LQ96EE3 AC142472.1-201ENST00000612013 1741 ntBASIC20.95■□□□□ 0.94
SEH1LQ96EE3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SEH1LQ96EE3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SEH1LQ96EE3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.94■□□□□ 0.94
SEH1LQ96EE3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SEH1LQ96EE3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
SEH1LQ96EE3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SEH1LQ96EE3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SEH1LQ96EE3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SEH1LQ96EE3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEH1LQ96EE3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEH1LQ96EE3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEH1LQ96EE3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.93■□□□□ 0.94
SEH1LQ96EE3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SEH1LQ96EE3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SEH1LQ96EE3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEH1LQ96EE3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEH1LQ96EE3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.92■□□□□ 0.94
SEH1LQ96EE3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEH1LQ96EE3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SEH1LQ96EE3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEH1LQ96EE3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
SEH1LQ96EE3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms