Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.63■□□□□ 0.89
CLDND2Q8NHS1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CLDND2Q8NHS1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDND2Q8NHS1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CLDND2Q8NHS1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDND2Q8NHS1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDND2Q8NHS1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDND2Q8NHS1 AC093536.1-201ENST00000569153 554 ntBASIC20.62■□□□□ 0.89
CLDND2Q8NHS1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.62■□□□□ 0.89
CLDND2Q8NHS1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDND2Q8NHS1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDND2Q8NHS1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLDND2Q8NHS1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CLDND2Q8NHS1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDND2Q8NHS1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDND2Q8NHS1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDND2Q8NHS1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLDND2Q8NHS1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.61■□□□□ 0.89
CLDND2Q8NHS1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDND2Q8NHS1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDND2Q8NHS1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDND2Q8NHS1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDND2Q8NHS1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.61■□□□□ 0.89
CLDND2Q8NHS1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.61■□□□□ 0.89
CLDND2Q8NHS1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.6■□□□□ 0.89
CLDND2Q8NHS1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDND2Q8NHS1 MIR3960-201ENST00000583311 91 ntBASIC20.6■□□□□ 0.89
CLDND2Q8NHS1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLDND2Q8NHS1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLDND2Q8NHS1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDND2Q8NHS1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.59■□□□□ 0.89
CLDND2Q8NHS1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDND2Q8NHS1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.59■□□□□ 0.89
CLDND2Q8NHS1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDND2Q8NHS1 DUX4L18-201ENST00000553347 1267 ntBASIC20.59■□□□□ 0.89
CLDND2Q8NHS1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDND2Q8NHS1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.58■□□□□ 0.89
CLDND2Q8NHS1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.58■□□□□ 0.88
CLDND2Q8NHS1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
CLDND2Q8NHS1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDND2Q8NHS1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CLDND2Q8NHS1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDND2Q8NHS1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDND2Q8NHS1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDND2Q8NHS1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDND2Q8NHS1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLDND2Q8NHS1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDND2Q8NHS1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLDND2Q8NHS1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CLDND2Q8NHS1 RAP2CP1-202ENST00000605179 643 ntBASIC20.56■□□□□ 0.88
CLDND2Q8NHS1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CLDND2Q8NHS1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.56■□□□□ 0.88
CLDND2Q8NHS1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CLDND2Q8NHS1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDND2Q8NHS1 WHAMMP3-201ENST00000611636 1609 ntBASIC20.56■□□□□ 0.88
CLDND2Q8NHS1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDND2Q8NHS1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDND2Q8NHS1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDND2Q8NHS1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CLDND2Q8NHS1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CLDND2Q8NHS1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CLDND2Q8NHS1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
CLDND2Q8NHS1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLDND2Q8NHS1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDND2Q8NHS1 AL359504.2-201ENST00000605506 1601 ntBASIC20.54■□□□□ 0.88
CLDND2Q8NHS1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CLDND2Q8NHS1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDND2Q8NHS1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.53■□□□□ 0.88
CLDND2Q8NHS1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.53■□□□□ 0.88
CLDND2Q8NHS1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.53■□□□□ 0.88
CLDND2Q8NHS1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.53■□□□□ 0.88
CLDND2Q8NHS1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDND2Q8NHS1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDND2Q8NHS1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDND2Q8NHS1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDND2Q8NHS1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDND2Q8NHS1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.52■□□□□ 0.88
CLDND2Q8NHS1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLDND2Q8NHS1 DUX4L9-201ENST00000449051 1259 ntBASIC20.52■□□□□ 0.88
CLDND2Q8NHS1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.52■□□□□ 0.88
CLDND2Q8NHS1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.52■□□□□ 0.88
CLDND2Q8NHS1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLDND2Q8NHS1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.52■□□□□ 0.88
CLDND2Q8NHS1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLDND2Q8NHS1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLDND2Q8NHS1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLDND2Q8NHS1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDND2Q8NHS1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLDND2Q8NHS1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDND2Q8NHS1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDND2Q8NHS1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDND2Q8NHS1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CLDND2Q8NHS1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDND2Q8NHS1 AL449106.1-201ENST00000608517 1980 ntBASIC20.5■□□□□ 0.87
CLDND2Q8NHS1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDND2Q8NHS1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.5■□□□□ 0.87
CLDND2Q8NHS1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDND2Q8NHS1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.5■□□□□ 0.87
CLDND2Q8NHS1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDND2Q8NHS1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms