Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SMRP1Q8NCR6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
SMRP1Q8NCR6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SMRP1Q8NCR6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
SMRP1Q8NCR6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
SMRP1Q8NCR6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SMRP1Q8NCR6 MIR638-201ENST00000385237 100 ntBASIC25.7■■□□□ 1.7
SMRP1Q8NCR6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.7■■□□□ 1.7
SMRP1Q8NCR6 MIR4787-201ENST00000607364 84 ntBASIC25.7■■□□□ 1.7
SMRP1Q8NCR6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SMRP1Q8NCR6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
SMRP1Q8NCR6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SMRP1Q8NCR6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.69■■□□□ 1.7
SMRP1Q8NCR6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.69■■□□□ 1.7
SMRP1Q8NCR6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.69■■□□□ 1.7
SMRP1Q8NCR6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SMRP1Q8NCR6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SMRP1Q8NCR6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SMRP1Q8NCR6 ABCB10P3-201ENST00000561950 2166 ntBASIC25.69■■□□□ 1.7
SMRP1Q8NCR6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
SMRP1Q8NCR6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SMRP1Q8NCR6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SMRP1Q8NCR6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.68■■□□□ 1.7
SMRP1Q8NCR6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.68■■□□□ 1.7
SMRP1Q8NCR6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SMRP1Q8NCR6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SMRP1Q8NCR6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
SMRP1Q8NCR6 BX664725.1-201ENST00000438252 379 ntBASIC25.67■■□□□ 1.7
SMRP1Q8NCR6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SMRP1Q8NCR6 UNC93B8-201ENST00000511903 705 ntBASIC25.67■■□□□ 1.7
SMRP1Q8NCR6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
SMRP1Q8NCR6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SMRP1Q8NCR6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SMRP1Q8NCR6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.66■■□□□ 1.7
SMRP1Q8NCR6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SMRP1Q8NCR6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SMRP1Q8NCR6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.65■■□□□ 1.7
SMRP1Q8NCR6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SMRP1Q8NCR6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.69
SMRP1Q8NCR6 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.64■■□□□ 1.69
SMRP1Q8NCR6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMRP1Q8NCR6 KRT16P3-201ENST00000439127 1283 ntBASIC25.63■■□□□ 1.69
SMRP1Q8NCR6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMRP1Q8NCR6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMRP1Q8NCR6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SMRP1Q8NCR6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.62■■□□□ 1.69
SMRP1Q8NCR6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.62■■□□□ 1.69
SMRP1Q8NCR6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SMRP1Q8NCR6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SMRP1Q8NCR6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SMRP1Q8NCR6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SMRP1Q8NCR6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
SMRP1Q8NCR6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.61■■□□□ 1.69
SMRP1Q8NCR6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SMRP1Q8NCR6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SMRP1Q8NCR6 AL139393.2-201ENST00000608721 2025 ntBASIC25.59■■□□□ 1.69
SMRP1Q8NCR6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SMRP1Q8NCR6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SMRP1Q8NCR6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.59■■□□□ 1.69
SMRP1Q8NCR6 AC022616.5-201ENST00000518796 181 ntBASIC25.59■■□□□ 1.69
SMRP1Q8NCR6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.59■■□□□ 1.69
SMRP1Q8NCR6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.59■■□□□ 1.69
SMRP1Q8NCR6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.59■■□□□ 1.69
SMRP1Q8NCR6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
SMRP1Q8NCR6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SMRP1Q8NCR6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SMRP1Q8NCR6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.58■■□□□ 1.69
SMRP1Q8NCR6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
SMRP1Q8NCR6 WHAMMP3-201ENST00000611636 1609 ntBASIC25.58■■□□□ 1.69
SMRP1Q8NCR6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SMRP1Q8NCR6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.57■■□□□ 1.68
SMRP1Q8NCR6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMRP1Q8NCR6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
SMRP1Q8NCR6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.57■■□□□ 1.68
SMRP1Q8NCR6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMRP1Q8NCR6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.57■■□□□ 1.68
SMRP1Q8NCR6 AL139246.5-201ENST00000606645 996 ntBASIC25.57■■□□□ 1.68
SMRP1Q8NCR6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
SMRP1Q8NCR6 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.57■■□□□ 1.68
SMRP1Q8NCR6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.56■■□□□ 1.68
SMRP1Q8NCR6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.56■■□□□ 1.68
SMRP1Q8NCR6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SMRP1Q8NCR6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMRP1Q8NCR6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMRP1Q8NCR6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.55■■□□□ 1.68
SMRP1Q8NCR6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.55■■□□□ 1.68
SMRP1Q8NCR6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.55■■□□□ 1.68
SMRP1Q8NCR6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMRP1Q8NCR6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SMRP1Q8NCR6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
SMRP1Q8NCR6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.54■■□□□ 1.68
SMRP1Q8NCR6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SMRP1Q8NCR6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SMRP1Q8NCR6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.54■■□□□ 1.68
SMRP1Q8NCR6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SMRP1Q8NCR6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.53■■□□□ 1.68
SMRP1Q8NCR6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.53■■□□□ 1.68
SMRP1Q8NCR6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.53■■□□□ 1.68
SMRP1Q8NCR6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.53■■□□□ 1.68
SMRP1Q8NCR6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms