Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
TTC39CQ8N584 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TTC39CQ8N584 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.02■■□□□ 1.76
TTC39CQ8N584 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
TTC39CQ8N584 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TTC39CQ8N584 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
TTC39CQ8N584 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
TTC39CQ8N584 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.01■■□□□ 1.75
TTC39CQ8N584 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.01■■□□□ 1.75
TTC39CQ8N584 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.01■■□□□ 1.75
TTC39CQ8N584 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
TTC39CQ8N584 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
TTC39CQ8N584 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
TTC39CQ8N584 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.99■■□□□ 1.75
TTC39CQ8N584 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
TTC39CQ8N584 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TTC39CQ8N584 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
TTC39CQ8N584 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TTC39CQ8N584 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.98■■□□□ 1.75
TTC39CQ8N584 AC093536.1-201ENST00000569153 554 ntBASIC25.98■■□□□ 1.75
TTC39CQ8N584 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TTC39CQ8N584 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.98■■□□□ 1.75
TTC39CQ8N584 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
TTC39CQ8N584 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
TTC39CQ8N584 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.98■■□□□ 1.75
TTC39CQ8N584 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TTC39CQ8N584 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
TTC39CQ8N584 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.97■■□□□ 1.75
TTC39CQ8N584 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.96■■□□□ 1.75
TTC39CQ8N584 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TTC39CQ8N584 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
TTC39CQ8N584 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.96■■□□□ 1.75
TTC39CQ8N584 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
TTC39CQ8N584 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
TTC39CQ8N584 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TTC39CQ8N584 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
TTC39CQ8N584 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
TTC39CQ8N584 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TTC39CQ8N584 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TTC39CQ8N584 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
TTC39CQ8N584 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TTC39CQ8N584 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TTC39CQ8N584 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.94■■□□□ 1.74
TTC39CQ8N584 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TTC39CQ8N584 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TTC39CQ8N584 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TTC39CQ8N584 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TTC39CQ8N584 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.93■■□□□ 1.74
TTC39CQ8N584 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TTC39CQ8N584 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
TTC39CQ8N584 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TTC39CQ8N584 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.92■■□□□ 1.74
TTC39CQ8N584 AC026202.3-201ENST00000600805 1127 ntBASIC25.92■■□□□ 1.74
TTC39CQ8N584 RAP2CP1-202ENST00000605179 643 ntBASIC25.92■■□□□ 1.74
TTC39CQ8N584 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TTC39CQ8N584 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.91■■□□□ 1.74
TTC39CQ8N584 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.91■■□□□ 1.74
TTC39CQ8N584 ABHD17AP5-201ENST00000580133 923 ntBASIC25.91■■□□□ 1.74
TTC39CQ8N584 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TTC39CQ8N584 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
TTC39CQ8N584 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TTC39CQ8N584 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TTC39CQ8N584 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TTC39CQ8N584 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TTC39CQ8N584 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.9■■□□□ 1.74
TTC39CQ8N584 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TTC39CQ8N584 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.9■■□□□ 1.74
TTC39CQ8N584 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
TTC39CQ8N584 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TTC39CQ8N584 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.9■■□□□ 1.74
TTC39CQ8N584 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TTC39CQ8N584 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.9■■□□□ 1.74
TTC39CQ8N584 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TTC39CQ8N584 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
TTC39CQ8N584 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.88■■□□□ 1.73
TTC39CQ8N584 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.88■■□□□ 1.73
TTC39CQ8N584 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.88■■□□□ 1.73
TTC39CQ8N584 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TTC39CQ8N584 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
TTC39CQ8N584 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.86■■□□□ 1.73
TTC39CQ8N584 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
TTC39CQ8N584 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TTC39CQ8N584 AC133552.2-201ENST00000619106 1032 ntBASIC25.86■■□□□ 1.73
TTC39CQ8N584 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TTC39CQ8N584 AC009831.1-201ENST00000580420 1582 ntBASIC25.86■■□□□ 1.73
TTC39CQ8N584 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TTC39CQ8N584 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
TTC39CQ8N584 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
TTC39CQ8N584 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.85■■□□□ 1.73
TTC39CQ8N584 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TTC39CQ8N584 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TTC39CQ8N584 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.84■■□□□ 1.73
TTC39CQ8N584 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.84■■□□□ 1.73
TTC39CQ8N584 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
TTC39CQ8N584 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TTC39CQ8N584 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.84■■□□□ 1.73
TTC39CQ8N584 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
TTC39CQ8N584 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TTC39CQ8N584 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TTC39CQ8N584 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms