Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.52■■□□□ 1.84
NPAS4Q8IUM7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.51■■□□□ 1.84
NPAS4Q8IUM7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.51■■□□□ 1.84
NPAS4Q8IUM7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.51■■□□□ 1.83
NPAS4Q8IUM7 GUSBP5-201ENST00000418136 578 ntBASIC26.51■■□□□ 1.83
NPAS4Q8IUM7 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.51■■□□□ 1.83
NPAS4Q8IUM7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.51■■□□□ 1.83
NPAS4Q8IUM7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NPAS4Q8IUM7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
NPAS4Q8IUM7 AC087393.1-201ENST00000582896 145 ntBASIC26.51■■□□□ 1.83
NPAS4Q8IUM7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
NPAS4Q8IUM7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
NPAS4Q8IUM7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NPAS4Q8IUM7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.49■■□□□ 1.83
NPAS4Q8IUM7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
NPAS4Q8IUM7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
NPAS4Q8IUM7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
NPAS4Q8IUM7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NPAS4Q8IUM7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NPAS4Q8IUM7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
NPAS4Q8IUM7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.48■■□□□ 1.83
NPAS4Q8IUM7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
NPAS4Q8IUM7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.48■■□□□ 1.83
NPAS4Q8IUM7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NPAS4Q8IUM7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.47■■□□□ 1.83
NPAS4Q8IUM7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NPAS4Q8IUM7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NPAS4Q8IUM7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NPAS4Q8IUM7 AL592295.1-201ENST00000400984 884 ntBASIC26.46■■□□□ 1.83
NPAS4Q8IUM7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.46■■□□□ 1.83
NPAS4Q8IUM7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.46■■□□□ 1.83
NPAS4Q8IUM7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NPAS4Q8IUM7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
NPAS4Q8IUM7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
NPAS4Q8IUM7 RPS2P7-201ENST00000447334 885 ntBASIC26.45■■□□□ 1.82
NPAS4Q8IUM7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.45■■□□□ 1.82
NPAS4Q8IUM7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.45■■□□□ 1.82
NPAS4Q8IUM7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
NPAS4Q8IUM7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
NPAS4Q8IUM7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
NPAS4Q8IUM7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
NPAS4Q8IUM7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NPAS4Q8IUM7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.43■■□□□ 1.82
NPAS4Q8IUM7 AC131212.1-201ENST00000613771 668 ntBASIC26.43■■□□□ 1.82
NPAS4Q8IUM7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NPAS4Q8IUM7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NPAS4Q8IUM7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
NPAS4Q8IUM7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
NPAS4Q8IUM7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
NPAS4Q8IUM7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.42■■□□□ 1.82
NPAS4Q8IUM7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
NPAS4Q8IUM7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.42■■□□□ 1.82
NPAS4Q8IUM7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
NPAS4Q8IUM7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.42■■□□□ 1.82
NPAS4Q8IUM7 LONRF2P2-201ENST00000439212 571 ntBASIC26.41■■□□□ 1.82
NPAS4Q8IUM7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
NPAS4Q8IUM7 THA1P-201ENST00000590384 1145 ntBASIC26.41■■□□□ 1.82
NPAS4Q8IUM7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
NPAS4Q8IUM7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NPAS4Q8IUM7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
NPAS4Q8IUM7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
NPAS4Q8IUM7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
NPAS4Q8IUM7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.4■■□□□ 1.82
NPAS4Q8IUM7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
NPAS4Q8IUM7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
NPAS4Q8IUM7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
NPAS4Q8IUM7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
NPAS4Q8IUM7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
NPAS4Q8IUM7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
NPAS4Q8IUM7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
NPAS4Q8IUM7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.39■■□□□ 1.82
NPAS4Q8IUM7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.39■■□□□ 1.82
NPAS4Q8IUM7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.39■■□□□ 1.82
NPAS4Q8IUM7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
NPAS4Q8IUM7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.38■■□□□ 1.81
NPAS4Q8IUM7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
NPAS4Q8IUM7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
NPAS4Q8IUM7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
NPAS4Q8IUM7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
NPAS4Q8IUM7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NPAS4Q8IUM7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
NPAS4Q8IUM7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.37■■□□□ 1.81
NPAS4Q8IUM7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.37■■□□□ 1.81
NPAS4Q8IUM7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
NPAS4Q8IUM7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
NPAS4Q8IUM7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.37■■□□□ 1.81
NPAS4Q8IUM7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.36■■□□□ 1.81
NPAS4Q8IUM7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
NPAS4Q8IUM7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
NPAS4Q8IUM7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NPAS4Q8IUM7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
NPAS4Q8IUM7 DRD5P2-201ENST00000421395 2012 ntBASIC26.35■■□□□ 1.81
NPAS4Q8IUM7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
NPAS4Q8IUM7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.34■■□□□ 1.81
NPAS4Q8IUM7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NPAS4Q8IUM7 AL356441.2-201ENST00000443009 864 ntBASIC26.34■■□□□ 1.81
NPAS4Q8IUM7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.34■■□□□ 1.81
NPAS4Q8IUM7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NPAS4Q8IUM7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
NPAS4Q8IUM7 AC239859.2-201ENST00000444165 318 ntBASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms