Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.41■■□□□ 1.02
RTTNQ86VV8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTTNQ86VV8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
RTTNQ86VV8 AC025884.2-201ENST00000553429 711 ntBASIC21.4■■□□□ 1.02
RTTNQ86VV8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RTTNQ86VV8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
RTTNQ86VV8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
RTTNQ86VV8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
RTTNQ86VV8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTTNQ86VV8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RTTNQ86VV8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTTNQ86VV8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTTNQ86VV8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RTTNQ86VV8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RTTNQ86VV8 AL157400.5-201ENST00000507624 621 ntBASIC21.39■■□□□ 1.01
RTTNQ86VV8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTTNQ86VV8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RTTNQ86VV8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RTTNQ86VV8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
RTTNQ86VV8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTTNQ86VV8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RTTNQ86VV8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RTTNQ86VV8 AP004609.3-201ENST00000610705 1884 ntBASIC21.37■■□□□ 1.01
RTTNQ86VV8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTTNQ86VV8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTTNQ86VV8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTTNQ86VV8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTTNQ86VV8 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTTNQ86VV8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RTTNQ86VV8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.36■■□□□ 1.01
RTTNQ86VV8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RTTNQ86VV8 RARRES2P1-201ENST00000474487 481 ntBASIC21.36■■□□□ 1.01
RTTNQ86VV8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTTNQ86VV8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTTNQ86VV8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTTNQ86VV8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.35■■□□□ 1.01
RTTNQ86VV8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RTTNQ86VV8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTTNQ86VV8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.35■■□□□ 1.01
RTTNQ86VV8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.34■■□□□ 1.01
RTTNQ86VV8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.34■■□□□ 1.01
RTTNQ86VV8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.34■■□□□ 1.01
RTTNQ86VV8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTTNQ86VV8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.33■■□□□ 1.01
RTTNQ86VV8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.33■■□□□ 1
RTTNQ86VV8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
RTTNQ86VV8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RTTNQ86VV8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RTTNQ86VV8 AC022413.1-201ENST00000624602 984 ntBASIC21.32■■□□□ 1
RTTNQ86VV8 ERN1-208ENST00000606895 2068 ntBASIC21.32■■□□□ 1
RTTNQ86VV8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTTNQ86VV8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RTTNQ86VV8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTTNQ86VV8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.31■■□□□ 1
RTTNQ86VV8 AL359504.2-201ENST00000605506 1601 ntBASIC21.31■■□□□ 1
RTTNQ86VV8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.31■■□□□ 1
RTTNQ86VV8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.31■■□□□ 1
RTTNQ86VV8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.31■■□□□ 1
RTTNQ86VV8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RTTNQ86VV8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTTNQ86VV8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RTTNQ86VV8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.31■■□□□ 1
RTTNQ86VV8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTTNQ86VV8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.3■■□□□ 1
RTTNQ86VV8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTTNQ86VV8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.3■■□□□ 1
RTTNQ86VV8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.3■■□□□ 1
RTTNQ86VV8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTTNQ86VV8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.3■■□□□ 1
RTTNQ86VV8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTTNQ86VV8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTTNQ86VV8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RTTNQ86VV8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTTNQ86VV8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTTNQ86VV8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RTTNQ86VV8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.28■■□□□ 1
RTTNQ86VV8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
RTTNQ86VV8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.28■■□□□ 1
RTTNQ86VV8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.28■■□□□ 1
RTTNQ86VV8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.28■■□□□ 1
RTTNQ86VV8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.28■■□□□ 1
RTTNQ86VV8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.28■■□□□ 1
RTTNQ86VV8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTTNQ86VV8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.27■■□□□ 1
RTTNQ86VV8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTTNQ86VV8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.27■■□□□ 1
RTTNQ86VV8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RTTNQ86VV8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.27■□□□□ 0.99
RTTNQ86VV8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTTNQ86VV8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTTNQ86VV8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTTNQ86VV8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTTNQ86VV8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTTNQ86VV8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.26■□□□□ 0.99
RTTNQ86VV8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.25■□□□□ 0.99
RTTNQ86VV8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.25■□□□□ 0.99
RTTNQ86VV8 AC142472.1-201ENST00000612013 1741 ntBASIC21.25■□□□□ 0.99
RTTNQ86VV8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTTNQ86VV8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.25■□□□□ 0.99
RTTNQ86VV8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms