Protein–RNA interactions for Protein: Q86TD4

SRL, Sarcalumenin, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRLQ86TD4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SRLQ86TD4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SRLQ86TD4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
SRLQ86TD4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SRLQ86TD4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.53■■□□□ 1.68
SRLQ86TD4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
SRLQ86TD4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SRLQ86TD4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
SRLQ86TD4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
SRLQ86TD4 AC148477.6-201ENST00000623746 465 ntBASIC25.52■■□□□ 1.68
SRLQ86TD4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SRLQ86TD4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
SRLQ86TD4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
SRLQ86TD4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SRLQ86TD4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
SRLQ86TD4 AC145676.1-201ENST00000514988 2004 ntBASIC25.51■■□□□ 1.67
SRLQ86TD4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SRLQ86TD4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.5■■□□□ 1.67
SRLQ86TD4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SRLQ86TD4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
SRLQ86TD4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.5■■□□□ 1.67
SRLQ86TD4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SRLQ86TD4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.5■■□□□ 1.67
SRLQ86TD4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SRLQ86TD4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SRLQ86TD4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SRLQ86TD4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
SRLQ86TD4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.49■■□□□ 1.67
SRLQ86TD4 AC018358.1-201ENST00000631079 1402 ntBASIC25.48■■□□□ 1.67
SRLQ86TD4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SRLQ86TD4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SRLQ86TD4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SRLQ86TD4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.48■■□□□ 1.67
SRLQ86TD4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.48■■□□□ 1.67
SRLQ86TD4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.47■■□□□ 1.67
SRLQ86TD4 MIR219A2-201ENST00000608502 1504 ntBASIC25.47■■□□□ 1.67
SRLQ86TD4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.47■■□□□ 1.67
SRLQ86TD4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
SRLQ86TD4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SRLQ86TD4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SRLQ86TD4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SRLQ86TD4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SRLQ86TD4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.46■■□□□ 1.67
SRLQ86TD4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SRLQ86TD4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SRLQ86TD4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SRLQ86TD4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SRLQ86TD4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SRLQ86TD4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.46■■□□□ 1.67
SRLQ86TD4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SRLQ86TD4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.46■■□□□ 1.67
SRLQ86TD4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SRLQ86TD4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SRLQ86TD4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SRLQ86TD4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.45■■□□□ 1.66
SRLQ86TD4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.66
SRLQ86TD4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
SRLQ86TD4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SRLQ86TD4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SRLQ86TD4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SRLQ86TD4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
SRLQ86TD4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SRLQ86TD4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
SRLQ86TD4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.44■■□□□ 1.66
SRLQ86TD4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.44■■□□□ 1.66
SRLQ86TD4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.44■■□□□ 1.66
SRLQ86TD4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SRLQ86TD4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SRLQ86TD4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SRLQ86TD4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SRLQ86TD4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SRLQ86TD4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SRLQ86TD4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
SRLQ86TD4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC25.43■■□□□ 1.66
SRLQ86TD4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SRLQ86TD4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.43■■□□□ 1.66
SRLQ86TD4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SRLQ86TD4 LINC00543-201ENST00000567234 1845 ntBASIC25.42■■□□□ 1.66
SRLQ86TD4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SRLQ86TD4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SRLQ86TD4 AC012676.1-201ENST00000574705 1949 ntBASIC25.42■■□□□ 1.66
SRLQ86TD4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.42■■□□□ 1.66
SRLQ86TD4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.42■■□□□ 1.66
SRLQ86TD4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SRLQ86TD4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SRLQ86TD4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SRLQ86TD4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
SRLQ86TD4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SRLQ86TD4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.41■■□□□ 1.66
SRLQ86TD4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SRLQ86TD4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.41■■□□□ 1.66
SRLQ86TD4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SRLQ86TD4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.4■■□□□ 1.66
SRLQ86TD4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SRLQ86TD4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SRLQ86TD4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SRLQ86TD4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SRLQ86TD4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
SRLQ86TD4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SRLQ86TD4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms