Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PPP4R3AQ6IN85 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
PPP4R3AQ6IN85 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
PPP4R3AQ6IN85 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC27.74■■■□□ 2.03
PPP4R3AQ6IN85 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PPP4R3AQ6IN85 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PPP4R3AQ6IN85 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC27.74■■■□□ 2.03
PPP4R3AQ6IN85 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.74■■■□□ 2.03
PPP4R3AQ6IN85 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
PPP4R3AQ6IN85 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC27.73■■■□□ 2.03
PPP4R3AQ6IN85 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
PPP4R3AQ6IN85 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC27.73■■■□□ 2.03
PPP4R3AQ6IN85 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
PPP4R3AQ6IN85 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PPP4R3AQ6IN85 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC27.72■■■□□ 2.03
PPP4R3AQ6IN85 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PPP4R3AQ6IN85 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
PPP4R3AQ6IN85 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC27.72■■■□□ 2.03
PPP4R3AQ6IN85 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PPP4R3AQ6IN85 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PPP4R3AQ6IN85 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
PPP4R3AQ6IN85 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PPP4R3AQ6IN85 RP9P-202ENST00000450133 1212 ntBASIC27.71■■■□□ 2.03
PPP4R3AQ6IN85 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
PPP4R3AQ6IN85 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
PPP4R3AQ6IN85 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
PPP4R3AQ6IN85 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
PPP4R3AQ6IN85 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
PPP4R3AQ6IN85 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
PPP4R3AQ6IN85 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
PPP4R3AQ6IN85 GFER-205ENST00000569451 517 ntTSL 5 BASIC27.69■■■□□ 2.02
PPP4R3AQ6IN85 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
PPP4R3AQ6IN85 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC27.68■■■□□ 2.02
PPP4R3AQ6IN85 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PPP4R3AQ6IN85 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PPP4R3AQ6IN85 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC27.67■■■□□ 2.02
PPP4R3AQ6IN85 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.67■■■□□ 2.02
PPP4R3AQ6IN85 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.67■■■□□ 2.02
PPP4R3AQ6IN85 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC27.66■■■□□ 2.02
PPP4R3AQ6IN85 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
PPP4R3AQ6IN85 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
PPP4R3AQ6IN85 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.66■■■□□ 2.02
PPP4R3AQ6IN85 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.65■■■□□ 2.02
PPP4R3AQ6IN85 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC27.65■■■□□ 2.02
PPP4R3AQ6IN85 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.65■■■□□ 2.02
PPP4R3AQ6IN85 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.64■■■□□ 2.02
PPP4R3AQ6IN85 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
PPP4R3AQ6IN85 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
PPP4R3AQ6IN85 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
PPP4R3AQ6IN85 AC093536.1-201ENST00000569153 554 ntBASIC27.64■■■□□ 2.02
PPP4R3AQ6IN85 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PPP4R3AQ6IN85 AC026202.3-201ENST00000600805 1127 ntBASIC27.63■■■□□ 2.01
PPP4R3AQ6IN85 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PPP4R3AQ6IN85 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
PPP4R3AQ6IN85 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
PPP4R3AQ6IN85 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
PPP4R3AQ6IN85 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.62■■■□□ 2.01
PPP4R3AQ6IN85 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
PPP4R3AQ6IN85 RAP2CP1-202ENST00000605179 643 ntBASIC27.61■■■□□ 2.01
PPP4R3AQ6IN85 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC27.61■■■□□ 2.01
PPP4R3AQ6IN85 HYI-213ENST00000583037 1322 ntTSL 5 BASIC27.61■■■□□ 2.01
PPP4R3AQ6IN85 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
PPP4R3AQ6IN85 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
PPP4R3AQ6IN85 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PPP4R3AQ6IN85 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC27.6■■■□□ 2.01
PPP4R3AQ6IN85 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PPP4R3AQ6IN85 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PPP4R3AQ6IN85 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
PPP4R3AQ6IN85 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
PPP4R3AQ6IN85 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
PPP4R3AQ6IN85 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC27.6■■■□□ 2.01
PPP4R3AQ6IN85 ABHD17AP5-201ENST00000580133 923 ntBASIC27.6■■■□□ 2.01
PPP4R3AQ6IN85 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PPP4R3AQ6IN85 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC27.59■■■□□ 2.01
PPP4R3AQ6IN85 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC27.59■■■□□ 2.01
PPP4R3AQ6IN85 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PPP4R3AQ6IN85 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
PPP4R3AQ6IN85 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
PPP4R3AQ6IN85 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PPP4R3AQ6IN85 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC27.58■■■□□ 2.01
PPP4R3AQ6IN85 AC009831.1-201ENST00000580420 1582 ntBASIC27.57■■■□□ 2
PPP4R3AQ6IN85 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PPP4R3AQ6IN85 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC27.57■■■□□ 2
PPP4R3AQ6IN85 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC27.57■■■□□ 2
PPP4R3AQ6IN85 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PPP4R3AQ6IN85 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC27.57■■■□□ 2
PPP4R3AQ6IN85 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PPP4R3AQ6IN85 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC27.56■■■□□ 2
PPP4R3AQ6IN85 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PPP4R3AQ6IN85 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC27.56■■■□□ 2
PPP4R3AQ6IN85 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.56■■■□□ 2
PPP4R3AQ6IN85 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC27.56■■■□□ 2
PPP4R3AQ6IN85 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
PPP4R3AQ6IN85 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
PPP4R3AQ6IN85 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.55■■■□□ 2
PPP4R3AQ6IN85 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC27.55■■■□□ 2
PPP4R3AQ6IN85 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
PPP4R3AQ6IN85 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.54■■■□□ 2
PPP4R3AQ6IN85 AC133552.2-201ENST00000619106 1032 ntBASIC27.54■■■□□ 2
PPP4R3AQ6IN85 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms