Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC021242.3-201ENST00000607598 1377 ntBASIC13.85□□□□□ -0.19
UBR4Q5T4S7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBR4Q5T4S7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBR4Q5T4S7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
UBR4Q5T4S7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBR4Q5T4S7 BX664725.1-201ENST00000438252 379 ntBASIC13.84□□□□□ -0.19
UBR4Q5T4S7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC13.84□□□□□ -0.19
UBR4Q5T4S7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC13.84□□□□□ -0.19
UBR4Q5T4S7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBR4Q5T4S7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBR4Q5T4S7 AC019171.1-201ENST00000601251 1056 ntBASIC13.84□□□□□ -0.19
UBR4Q5T4S7 AL355001.2-201ENST00000620617 1191 ntBASIC13.84□□□□□ -0.19
UBR4Q5T4S7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
UBR4Q5T4S7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBR4Q5T4S7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC13.84□□□□□ -0.19
UBR4Q5T4S7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
UBR4Q5T4S7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
UBR4Q5T4S7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
UBR4Q5T4S7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
UBR4Q5T4S7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
UBR4Q5T4S7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
UBR4Q5T4S7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBR4Q5T4S7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
UBR4Q5T4S7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC13.83□□□□□ -0.2
UBR4Q5T4S7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC13.83□□□□□ -0.2
UBR4Q5T4S7 AC135983.2-203ENST00000454486 1613 ntBASIC13.83□□□□□ -0.2
UBR4Q5T4S7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBR4Q5T4S7 UNC93B3-201ENST00000308076 687 ntBASIC13.82□□□□□ -0.2
UBR4Q5T4S7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBR4Q5T4S7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC13.82□□□□□ -0.2
UBR4Q5T4S7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
UBR4Q5T4S7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBR4Q5T4S7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
UBR4Q5T4S7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC13.81□□□□□ -0.2
UBR4Q5T4S7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC13.81□□□□□ -0.2
UBR4Q5T4S7 AL512631.2-201ENST00000604634 923 ntBASIC13.81□□□□□ -0.2
UBR4Q5T4S7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC13.81□□□□□ -0.2
UBR4Q5T4S7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBR4Q5T4S7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.81□□□□□ -0.2
UBR4Q5T4S7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.81□□□□□ -0.2
UBR4Q5T4S7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBR4Q5T4S7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBR4Q5T4S7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBR4Q5T4S7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
UBR4Q5T4S7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBR4Q5T4S7 AL359258.2-201ENST00000564063 1566 ntBASIC13.8□□□□□ -0.2
UBR4Q5T4S7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBR4Q5T4S7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC13.8□□□□□ -0.2
UBR4Q5T4S7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UBR4Q5T4S7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
UBR4Q5T4S7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC13.8□□□□□ -0.2
UBR4Q5T4S7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBR4Q5T4S7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC13.79□□□□□ -0.2
UBR4Q5T4S7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
UBR4Q5T4S7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBR4Q5T4S7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC13.79□□□□□ -0.2
UBR4Q5T4S7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC13.79□□□□□ -0.2
UBR4Q5T4S7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBR4Q5T4S7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBR4Q5T4S7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBR4Q5T4S7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBR4Q5T4S7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC13.79□□□□□ -0.2
UBR4Q5T4S7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC13.78□□□□□ -0.2
UBR4Q5T4S7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC13.78□□□□□ -0.2
UBR4Q5T4S7 AC092028.1-203ENST00000608262 953 ntBASIC13.78□□□□□ -0.2
UBR4Q5T4S7 AC092437.1-201ENST00000624794 1048 ntBASIC13.78□□□□□ -0.2
UBR4Q5T4S7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBR4Q5T4S7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBR4Q5T4S7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBR4Q5T4S7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC13.78□□□□□ -0.2
UBR4Q5T4S7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC13.78□□□□□ -0.2
UBR4Q5T4S7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC13.78□□□□□ -0.2
UBR4Q5T4S7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC13.77□□□□□ -0.2
UBR4Q5T4S7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC13.77□□□□□ -0.2
UBR4Q5T4S7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
UBR4Q5T4S7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBR4Q5T4S7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC13.77□□□□□ -0.21
UBR4Q5T4S7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC13.77□□□□□ -0.21
UBR4Q5T4S7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
UBR4Q5T4S7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC13.77□□□□□ -0.21
UBR4Q5T4S7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBR4Q5T4S7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC13.77□□□□□ -0.21
UBR4Q5T4S7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.77□□□□□ -0.21
UBR4Q5T4S7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.76□□□□□ -0.21
UBR4Q5T4S7 AL136967.2-201ENST00000623968 743 ntBASIC13.76□□□□□ -0.21
UBR4Q5T4S7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.76□□□□□ -0.21
UBR4Q5T4S7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBR4Q5T4S7 TMEM191A-211ENST00000637163 1067 ntBASIC13.76□□□□□ -0.21
UBR4Q5T4S7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC13.76□□□□□ -0.21
UBR4Q5T4S7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
UBR4Q5T4S7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC13.76□□□□□ -0.21
UBR4Q5T4S7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC13.76□□□□□ -0.21
UBR4Q5T4S7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC13.76□□□□□ -0.21
UBR4Q5T4S7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UBR4Q5T4S7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.76□□□□□ -0.21
UBR4Q5T4S7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC13.75□□□□□ -0.21
UBR4Q5T4S7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBR4Q5T4S7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC13.75□□□□□ -0.21
UBR4Q5T4S7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBR4Q5T4S7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms