Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LINC01556Q5JQF7 ABHD17AP5-201ENST00000580133 923 ntBASIC16.58■□□□□ 0.24
LINC01556Q5JQF7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC16.58■□□□□ 0.24
LINC01556Q5JQF7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.58■□□□□ 0.24
LINC01556Q5JQF7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC16.58■□□□□ 0.24
LINC01556Q5JQF7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01556Q5JQF7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01556Q5JQF7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01556Q5JQF7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01556Q5JQF7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01556Q5JQF7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01556Q5JQF7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01556Q5JQF7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01556Q5JQF7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
LINC01556Q5JQF7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LINC01556Q5JQF7 AC093536.1-201ENST00000569153 554 ntBASIC16.57■□□□□ 0.24
LINC01556Q5JQF7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC16.57■□□□□ 0.24
LINC01556Q5JQF7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC16.57■□□□□ 0.24
LINC01556Q5JQF7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01556Q5JQF7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LINC01556Q5JQF7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.56■□□□□ 0.24
LINC01556Q5JQF7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC01556Q5JQF7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC16.56■□□□□ 0.24
LINC01556Q5JQF7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01556Q5JQF7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC16.55■□□□□ 0.24
LINC01556Q5JQF7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LINC01556Q5JQF7 HES4-204ENST00000484667 667 ntTSL 3 BASIC16.55■□□□□ 0.24
LINC01556Q5JQF7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LINC01556Q5JQF7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LINC01556Q5JQF7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC01556Q5JQF7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
LINC01556Q5JQF7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01556Q5JQF7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.54■□□□□ 0.24
LINC01556Q5JQF7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01556Q5JQF7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01556Q5JQF7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC16.54■□□□□ 0.24
LINC01556Q5JQF7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LINC01556Q5JQF7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LINC01556Q5JQF7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01556Q5JQF7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01556Q5JQF7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01556Q5JQF7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01556Q5JQF7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.53■□□□□ 0.24
LINC01556Q5JQF7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01556Q5JQF7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
LINC01556Q5JQF7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01556Q5JQF7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01556Q5JQF7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01556Q5JQF7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01556Q5JQF7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC16.52■□□□□ 0.24
LINC01556Q5JQF7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01556Q5JQF7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
LINC01556Q5JQF7 AC026202.3-201ENST00000600805 1127 ntBASIC16.52■□□□□ 0.24
LINC01556Q5JQF7 RAP2CP1-202ENST00000605179 643 ntBASIC16.52■□□□□ 0.24
LINC01556Q5JQF7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01556Q5JQF7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LINC01556Q5JQF7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LINC01556Q5JQF7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.52■□□□□ 0.23
LINC01556Q5JQF7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LINC01556Q5JQF7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LINC01556Q5JQF7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01556Q5JQF7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01556Q5JQF7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01556Q5JQF7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01556Q5JQF7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LINC01556Q5JQF7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC01556Q5JQF7 AC133552.2-201ENST00000619106 1032 ntBASIC16.5■□□□□ 0.23
LINC01556Q5JQF7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC01556Q5JQF7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC01556Q5JQF7 AC009831.1-201ENST00000580420 1582 ntBASIC16.5■□□□□ 0.23
LINC01556Q5JQF7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01556Q5JQF7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01556Q5JQF7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
LINC01556Q5JQF7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01556Q5JQF7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01556Q5JQF7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LINC01556Q5JQF7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.49■□□□□ 0.23
LINC01556Q5JQF7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01556Q5JQF7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01556Q5JQF7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
LINC01556Q5JQF7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC16.49■□□□□ 0.23
LINC01556Q5JQF7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01556Q5JQF7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01556Q5JQF7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01556Q5JQF7 NTF6A-201ENST00000591175 560 ntBASIC16.48■□□□□ 0.23
LINC01556Q5JQF7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
LINC01556Q5JQF7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01556Q5JQF7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01556Q5JQF7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01556Q5JQF7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01556Q5JQF7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC16.47■□□□□ 0.23
LINC01556Q5JQF7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC16.47■□□□□ 0.23
LINC01556Q5JQF7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01556Q5JQF7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01556Q5JQF7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01556Q5JQF7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
LINC01556Q5JQF7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC16.47■□□□□ 0.23
LINC01556Q5JQF7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.47■□□□□ 0.23
LINC01556Q5JQF7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.47■□□□□ 0.23
LINC01556Q5JQF7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms