Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
EIF4A1P60842 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.59■■■□□ 2.65
EIF4A1P60842 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC31.59■■■□□ 2.65
EIF4A1P60842 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.58■■■□□ 2.65
EIF4A1P60842 MIR6765-201ENST00000614092 87 ntBASIC31.58■■■□□ 2.65
EIF4A1P60842 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.58■■■□□ 2.65
EIF4A1P60842 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
EIF4A1P60842 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
EIF4A1P60842 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
EIF4A1P60842 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC31.57■■■□□ 2.64
EIF4A1P60842 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
EIF4A1P60842 RARRES2P1-201ENST00000474487 481 ntBASIC31.56■■■□□ 2.64
EIF4A1P60842 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
EIF4A1P60842 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
EIF4A1P60842 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
EIF4A1P60842 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC31.55■■■□□ 2.64
EIF4A1P60842 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.55■■■□□ 2.64
EIF4A1P60842 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
EIF4A1P60842 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.54■■■□□ 2.64
EIF4A1P60842 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
EIF4A1P60842 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
EIF4A1P60842 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.53■■■□□ 2.64
EIF4A1P60842 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC31.53■■■□□ 2.64
EIF4A1P60842 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
EIF4A1P60842 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
EIF4A1P60842 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
EIF4A1P60842 AC018755.3-202ENST00000596210 929 ntBASIC31.52■■■□□ 2.64
EIF4A1P60842 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.52■■■□□ 2.64
EIF4A1P60842 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
EIF4A1P60842 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31.51■■■□□ 2.63
EIF4A1P60842 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
EIF4A1P60842 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC31.51■■■□□ 2.63
EIF4A1P60842 AC142472.1-201ENST00000612013 1741 ntBASIC31.51■■■□□ 2.63
EIF4A1P60842 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
EIF4A1P60842 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
EIF4A1P60842 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
EIF4A1P60842 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
EIF4A1P60842 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC31.49■■■□□ 2.63
EIF4A1P60842 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.49■■■□□ 2.63
EIF4A1P60842 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
EIF4A1P60842 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.48■■■□□ 2.63
EIF4A1P60842 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.48■■■□□ 2.63
EIF4A1P60842 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
EIF4A1P60842 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
EIF4A1P60842 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC31.48■■■□□ 2.63
EIF4A1P60842 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
EIF4A1P60842 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
EIF4A1P60842 AC010980.1-201ENST00000587192 1142 ntBASIC31.47■■■□□ 2.63
EIF4A1P60842 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
EIF4A1P60842 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
EIF4A1P60842 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
EIF4A1P60842 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
EIF4A1P60842 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
EIF4A1P60842 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.45■■■□□ 2.63
EIF4A1P60842 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31.45■■■□□ 2.63
EIF4A1P60842 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
EIF4A1P60842 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
EIF4A1P60842 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
EIF4A1P60842 PVT1_1.1-201ENST00000615125 194 ntBASIC31.44■■■□□ 2.62
EIF4A1P60842 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
EIF4A1P60842 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
EIF4A1P60842 BHLHE23-202ENST00000612929 1109 ntBASIC31.43■■■□□ 2.62
EIF4A1P60842 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
EIF4A1P60842 AP004609.3-201ENST00000610705 1884 ntBASIC31.42■■■□□ 2.62
EIF4A1P60842 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
EIF4A1P60842 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
EIF4A1P60842 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.42■■■□□ 2.62
EIF4A1P60842 AC074183.2-201ENST00000623112 922 ntBASIC31.42■■■□□ 2.62
EIF4A1P60842 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC31.42■■■□□ 2.62
EIF4A1P60842 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
EIF4A1P60842 BEX3-202ENST00000372634 753 ntTSL 2 BASIC31.41■■■□□ 2.62
EIF4A1P60842 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC31.41■■■□□ 2.62
EIF4A1P60842 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
EIF4A1P60842 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
EIF4A1P60842 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
EIF4A1P60842 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
EIF4A1P60842 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
EIF4A1P60842 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.4■■■□□ 2.62
EIF4A1P60842 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.4■■■□□ 2.62
EIF4A1P60842 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.4■■■□□ 2.62
EIF4A1P60842 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
EIF4A1P60842 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
EIF4A1P60842 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
EIF4A1P60842 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC31.4■■■□□ 2.62
EIF4A1P60842 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.39■■■□□ 2.62
EIF4A1P60842 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
EIF4A1P60842 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
EIF4A1P60842 AC139795.1-202ENST00000500444 432 ntBASIC31.38■■■□□ 2.61
EIF4A1P60842 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.37■■■□□ 2.61
EIF4A1P60842 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31.37■■■□□ 2.61
EIF4A1P60842 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
EIF4A1P60842 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
EIF4A1P60842 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
EIF4A1P60842 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
EIF4A1P60842 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
EIF4A1P60842 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.36■■■□□ 2.61
EIF4A1P60842 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC31.36■■■□□ 2.61
EIF4A1P60842 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
EIF4A1P60842 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC31.36■■■□□ 2.61
EIF4A1P60842 AC103834.1-201ENST00000520383 144 ntBASIC31.36■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms