Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
WNT3AP56704 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
WNT3AP56704 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
WNT3AP56704 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
WNT3AP56704 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.68■■□□□ 1.54
WNT3AP56704 AC092803.2-201ENST00000564287 1899 ntBASIC24.68■■□□□ 1.54
WNT3AP56704 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
WNT3AP56704 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
WNT3AP56704 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
WNT3AP56704 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.68■■□□□ 1.54
WNT3AP56704 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.68■■□□□ 1.54
WNT3AP56704 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
WNT3AP56704 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
WNT3AP56704 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.67■■□□□ 1.54
WNT3AP56704 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
WNT3AP56704 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
WNT3AP56704 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
WNT3AP56704 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
WNT3AP56704 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.66■■□□□ 1.54
WNT3AP56704 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
WNT3AP56704 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.66■■□□□ 1.54
WNT3AP56704 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
WNT3AP56704 GPX1-201ENST00000419349 1106 ntBASIC24.66■■□□□ 1.54
WNT3AP56704 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
WNT3AP56704 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.66■■□□□ 1.54
WNT3AP56704 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.66■■□□□ 1.54
WNT3AP56704 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.65■■□□□ 1.54
WNT3AP56704 AC025884.2-201ENST00000553429 711 ntBASIC24.65■■□□□ 1.54
WNT3AP56704 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
WNT3AP56704 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
WNT3AP56704 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.65■■□□□ 1.54
WNT3AP56704 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
WNT3AP56704 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
WNT3AP56704 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.64■■□□□ 1.54
WNT3AP56704 ECEL1P2-201ENST00000461596 1295 ntBASIC24.64■■□□□ 1.54
WNT3AP56704 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
WNT3AP56704 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.64■■□□□ 1.53
WNT3AP56704 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.53
WNT3AP56704 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.64■■□□□ 1.53
WNT3AP56704 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
WNT3AP56704 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.63■■□□□ 1.53
WNT3AP56704 AC145676.1-201ENST00000514988 2004 ntBASIC24.62■■□□□ 1.53
WNT3AP56704 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.62■■□□□ 1.53
WNT3AP56704 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
WNT3AP56704 SMPD5-203ENST00000639008 1464 ntBASIC24.62■■□□□ 1.53
WNT3AP56704 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.62■■□□□ 1.53
WNT3AP56704 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
WNT3AP56704 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
WNT3AP56704 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
WNT3AP56704 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.61■■□□□ 1.53
WNT3AP56704 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
WNT3AP56704 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
WNT3AP56704 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.6■■□□□ 1.53
WNT3AP56704 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
WNT3AP56704 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.6■■□□□ 1.53
WNT3AP56704 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
WNT3AP56704 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.6■■□□□ 1.53
WNT3AP56704 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.6■■□□□ 1.53
WNT3AP56704 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.6■■□□□ 1.53
WNT3AP56704 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
WNT3AP56704 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
WNT3AP56704 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
WNT3AP56704 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.59■■□□□ 1.53
WNT3AP56704 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.59■■□□□ 1.53
WNT3AP56704 DUSP8P4-201ENST00000399538 1761 ntBASIC24.58■■□□□ 1.53
WNT3AP56704 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.58■■□□□ 1.53
WNT3AP56704 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
WNT3AP56704 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
WNT3AP56704 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
WNT3AP56704 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
WNT3AP56704 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
WNT3AP56704 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.57■■□□□ 1.52
WNT3AP56704 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
WNT3AP56704 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.57■■□□□ 1.52
WNT3AP56704 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
WNT3AP56704 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
WNT3AP56704 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
WNT3AP56704 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
WNT3AP56704 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
WNT3AP56704 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
WNT3AP56704 ERN1-208ENST00000606895 2068 ntBASIC24.56■■□□□ 1.52
WNT3AP56704 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
WNT3AP56704 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.55■■□□□ 1.52
WNT3AP56704 MIR3960-201ENST00000583311 91 ntBASIC24.55■■□□□ 1.52
WNT3AP56704 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
WNT3AP56704 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
WNT3AP56704 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
WNT3AP56704 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
WNT3AP56704 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.54■■□□□ 1.52
WNT3AP56704 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.54■■□□□ 1.52
WNT3AP56704 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.54■■□□□ 1.52
WNT3AP56704 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
WNT3AP56704 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
WNT3AP56704 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.53■■□□□ 1.52
WNT3AP56704 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.53■■□□□ 1.52
WNT3AP56704 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
WNT3AP56704 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
WNT3AP56704 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
WNT3AP56704 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
WNT3AP56704 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms