Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
COL15A1P39059 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
COL15A1P39059 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.39■■■□□ 2.62
COL15A1P39059 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.39■■■□□ 2.62
COL15A1P39059 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
COL15A1P39059 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
COL15A1P39059 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC31.39■■■□□ 2.62
COL15A1P39059 AC139426.1-201ENST00000568218 2529 ntBASIC31.39■■■□□ 2.61
COL15A1P39059 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
COL15A1P39059 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
COL15A1P39059 OR2A1-AS1-204ENST00000470435 602 ntBASIC31.38■■■□□ 2.61
COL15A1P39059 AC103724.3-201ENST00000564481 992 ntBASIC31.38■■■□□ 2.61
COL15A1P39059 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
COL15A1P39059 WHAMMP3-201ENST00000611636 1609 ntBASIC31.36■■■□□ 2.61
COL15A1P39059 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
COL15A1P39059 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC31.36■■■□□ 2.61
COL15A1P39059 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31.36■■■□□ 2.61
COL15A1P39059 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.36■■■□□ 2.61
COL15A1P39059 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.35■■■□□ 2.61
COL15A1P39059 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
COL15A1P39059 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
COL15A1P39059 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
COL15A1P39059 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.33■■■□□ 2.61
COL15A1P39059 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
COL15A1P39059 PRTG-204ENST00000561292 833 ntTSL 3 BASIC31.33■■■□□ 2.61
COL15A1P39059 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
COL15A1P39059 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
COL15A1P39059 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
COL15A1P39059 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.32■■■□□ 2.61
COL15A1P39059 AC131212.1-201ENST00000613771 668 ntBASIC31.32■■■□□ 2.6
COL15A1P39059 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.32■■■□□ 2.6
COL15A1P39059 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
COL15A1P39059 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
COL15A1P39059 AL031848.2-201ENST00000607670 837 ntBASIC31.31■■■□□ 2.6
COL15A1P39059 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
COL15A1P39059 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
COL15A1P39059 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
COL15A1P39059 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC31.3■■■□□ 2.6
COL15A1P39059 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC31.3■■■□□ 2.6
COL15A1P39059 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
COL15A1P39059 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31.3■■■□□ 2.6
COL15A1P39059 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC31.3■■■□□ 2.6
COL15A1P39059 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
COL15A1P39059 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
COL15A1P39059 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.29■■■□□ 2.6
COL15A1P39059 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
COL15A1P39059 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC31.29■■■□□ 2.6
COL15A1P39059 THA1P-201ENST00000590384 1145 ntBASIC31.29■■■□□ 2.6
COL15A1P39059 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC31.28■■■□□ 2.6
COL15A1P39059 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC31.28■■■□□ 2.6
COL15A1P39059 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC31.28■■■□□ 2.6
COL15A1P39059 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
COL15A1P39059 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
COL15A1P39059 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.27■■■□□ 2.6
COL15A1P39059 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
COL15A1P39059 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
COL15A1P39059 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
COL15A1P39059 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
COL15A1P39059 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
COL15A1P39059 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.26■■■□□ 2.6
COL15A1P39059 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.6
COL15A1P39059 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC31.26■■■□□ 2.59
COL15A1P39059 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
COL15A1P39059 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
COL15A1P39059 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
COL15A1P39059 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
COL15A1P39059 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
COL15A1P39059 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
COL15A1P39059 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.25■■■□□ 2.59
COL15A1P39059 MTURN-203ENST00000409688 843 ntTSL 2 BASIC31.24■■■□□ 2.59
COL15A1P39059 AC019171.1-201ENST00000601251 1056 ntBASIC31.24■■■□□ 2.59
COL15A1P39059 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
COL15A1P39059 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
COL15A1P39059 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.23■■■□□ 2.59
COL15A1P39059 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
COL15A1P39059 AC087393.1-201ENST00000582896 145 ntBASIC31.22■■■□□ 2.59
COL15A1P39059 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
COL15A1P39059 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
COL15A1P39059 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
COL15A1P39059 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
COL15A1P39059 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
COL15A1P39059 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
COL15A1P39059 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
COL15A1P39059 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
COL15A1P39059 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
COL15A1P39059 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
COL15A1P39059 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.58
COL15A1P39059 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
COL15A1P39059 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.19■■■□□ 2.58
COL15A1P39059 AL356441.2-201ENST00000443009 864 ntBASIC31.18■■■□□ 2.58
COL15A1P39059 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC31.18■■■□□ 2.58
COL15A1P39059 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC31.18■■■□□ 2.58
COL15A1P39059 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC31.18■■■□□ 2.58
COL15A1P39059 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
COL15A1P39059 AC019069.1-201ENST00000610008 1333 ntBASIC31.18■■■□□ 2.58
COL15A1P39059 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
COL15A1P39059 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
COL15A1P39059 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
COL15A1P39059 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
COL15A1P39059 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC31.17■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms