Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC32.85■■■□□ 2.85
COL5A2P05997 WHAMMP3-201ENST00000611636 1609 ntBASIC32.85■■■□□ 2.85
COL5A2P05997 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
COL5A2P05997 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC32.85■■■□□ 2.85
COL5A2P05997 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC32.85■■■□□ 2.85
COL5A2P05997 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
COL5A2P05997 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC32.84■■■□□ 2.85
COL5A2P05997 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
COL5A2P05997 GRAMD4P7-201ENST00000578182 1232 ntBASIC32.84■■■□□ 2.85
COL5A2P05997 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC32.84■■■□□ 2.85
COL5A2P05997 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
COL5A2P05997 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC32.83■■■□□ 2.85
COL5A2P05997 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC32.83■■■□□ 2.85
COL5A2P05997 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
COL5A2P05997 RPS2P7-201ENST00000447334 885 ntBASIC32.83■■■□□ 2.85
COL5A2P05997 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
COL5A2P05997 LONRF2P2-201ENST00000439212 571 ntBASIC32.82■■■□□ 2.84
COL5A2P05997 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC32.82■■■□□ 2.84
COL5A2P05997 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC32.82■■■□□ 2.84
COL5A2P05997 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
COL5A2P05997 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
COL5A2P05997 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
COL5A2P05997 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC32.81■■■□□ 2.84
COL5A2P05997 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
COL5A2P05997 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
COL5A2P05997 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC32.8■■■□□ 2.84
COL5A2P05997 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
COL5A2P05997 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC32.8■■■□□ 2.84
COL5A2P05997 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
COL5A2P05997 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC32.8■■■□□ 2.84
COL5A2P05997 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
COL5A2P05997 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
COL5A2P05997 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
COL5A2P05997 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC32.79■■■□□ 2.84
COL5A2P05997 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC32.78■■■□□ 2.84
COL5A2P05997 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC32.78■■■□□ 2.84
COL5A2P05997 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC32.78■■■□□ 2.84
COL5A2P05997 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC32.78■■■□□ 2.84
COL5A2P05997 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
COL5A2P05997 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
COL5A2P05997 MIR935-201ENST00000401179 91 ntBASIC32.77■■■□□ 2.84
COL5A2P05997 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC32.77■■■□□ 2.84
COL5A2P05997 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC32.76■■■□□ 2.84
COL5A2P05997 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC32.76■■■□□ 2.84
COL5A2P05997 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC32.76■■■□□ 2.84
COL5A2P05997 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC32.76■■■□□ 2.83
COL5A2P05997 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC32.76■■■□□ 2.83
COL5A2P05997 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
COL5A2P05997 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
COL5A2P05997 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
COL5A2P05997 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
COL5A2P05997 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC32.75■■■□□ 2.83
COL5A2P05997 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
COL5A2P05997 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
COL5A2P05997 AC008406.3-201ENST00000620001 1374 ntBASIC32.74■■■□□ 2.83
COL5A2P05997 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
COL5A2P05997 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
COL5A2P05997 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC32.74■■■□□ 2.83
COL5A2P05997 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
COL5A2P05997 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC32.74■■■□□ 2.83
COL5A2P05997 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC32.74■■■□□ 2.83
COL5A2P05997 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
COL5A2P05997 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
COL5A2P05997 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
COL5A2P05997 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
COL5A2P05997 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC32.73■■■□□ 2.83
COL5A2P05997 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
COL5A2P05997 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC32.71■■■□□ 2.83
COL5A2P05997 UNC93B8-201ENST00000511903 705 ntBASIC32.71■■■□□ 2.83
COL5A2P05997 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
COL5A2P05997 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
COL5A2P05997 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
COL5A2P05997 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC32.7■■■□□ 2.82
COL5A2P05997 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC32.69■■■□□ 2.82
COL5A2P05997 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
COL5A2P05997 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
COL5A2P05997 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC32.68■■■□□ 2.82
COL5A2P05997 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
COL5A2P05997 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
COL5A2P05997 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC32.67■■■□□ 2.82
COL5A2P05997 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC32.67■■■□□ 2.82
COL5A2P05997 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC32.67■■■□□ 2.82
COL5A2P05997 MIR4787-201ENST00000607364 84 ntBASIC32.67■■■□□ 2.82
COL5A2P05997 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
COL5A2P05997 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
COL5A2P05997 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC32.67■■■□□ 2.82
COL5A2P05997 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
COL5A2P05997 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC32.66■■■□□ 2.82
COL5A2P05997 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC32.66■■■□□ 2.82
COL5A2P05997 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
COL5A2P05997 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC32.65■■■□□ 2.82
COL5A2P05997 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
COL5A2P05997 PEMT-206ENST00000435340 960 ntTSL 5 BASIC32.65■■■□□ 2.82
COL5A2P05997 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC32.65■■■□□ 2.82
COL5A2P05997 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
COL5A2P05997 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC32.64■■■□□ 2.82
COL5A2P05997 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
COL5A2P05997 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC32.64■■■□□ 2.82
COL5A2P05997 BX664725.1-201ENST00000438252 379 ntBASIC32.64■■■□□ 2.82
COL5A2P05997 KRT125P-201ENST00000546827 989 ntBASIC32.64■■■□□ 2.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms